PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Psi006990

Organism

Picea sitchensis

Taxonomic ID

3332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea

Family

Trihelix

Protein Properties

Length: 322aa MW: 36693 Da PI: 5.6475

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Psi#S41648326	PU_ref	Unigene	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	45.8	1.6e-14	51	137	1	83
trihelix 1 rWtkqevlaLiearremeerlrrgk......lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfd 83 rWt e l+L++ + +e++l+ + +W+ +s+++++ ++r++ qC++kwe l +ykkike+e++ ++++s +++ + Psi006990 51 RWTLTEMLVLVREKWAVENELQLSPsksqftGVSDKWSIISNRCAASHVQRTAGQCRKKWELLISDYKKIKEWERQ--CGVESYWSLSH 137 8*******************6532233336689**************************************8..99999998765 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF13837	2.6E-9	51	134	No hit	No description
PROSITE profile	PS50090	6.841	62	114	IPR017877	Myb-like domain

Sequence ? help Back to Top
Protein Sequence Length: 322 aa Download sequence Send to blast
MEGSHHYVSH FAQTQQEEGQ PASSIEELDP PLQEAARLSS SHSTRLQVAP RWTLTEMLVL 60 VREKWAVENE LQLSPSKSQF TGVSDKWSII SNRCAASHVQ RTAGQCRKKW ELLISDYKKI 120 KEWERQCGVE SYWSLSHSAK REHKLPFYLE RELFDVMDAN LDKTPTACPD ATFDSMDVAA 180 DSLFTANDDS QDDMVKMQDP TASGSGNEPL DSTIRHKRRR CSSEDERDHG IISVLRENCQ 240 NIQAVIRETT QAQMCSSQLD RDMYWKGIEV NKQVQLQTSE LDRELRRKQG QDLIDVLGGL 300 VNAVNRLVDT IQNKSSRQLN GP

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A9NXN9	0.0	A9NXN9_PICSI; Uncharacterized protein

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33550.1	1e-27	Trihelix family protein