PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Psi006518

Organism

Picea sitchensis

Taxonomic ID

3332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea

Family

bZIP

Protein Properties

Length: 446aa MW: 49024.5 Da PI: 6.2044

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Psi#S50072025	PU_ref	Unigene	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	31.1	5.1e-10	265	323	5	63
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 kr++r NR +A rs +RK +i eLe+kv++L++e ++L +l l+ + l++e+ Psi006518 265 KRAKRILANRQSAARSKERKMRYISELERKVQTLQTEATTLSAQLTLLQRDSMGLTNEN 323 9********************************************99998887777766 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	7.3E-18	261	325	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.932	263	326	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	1.4E-10	265	317	No hit	No description
Pfam	PF00170	1.1E-8	265	321	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	5.98E-11	265	316	No hit	No description
CDD	cd14703	6.07E-26	266	315	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 446 aa Download sequence Send to blast
MDEHPIPSPR PPVSPFSADS HSRPDASRTG DVLPPRKGGH RRAHSEIPRQ VSWDKVGKGV 60 KKEAEWDRDG DLNMEVGDGE DLFSMYIDLD KLNTLNTTSS ANPADIGEGS GESGRKTLNA 120 DDDNEDDKAG PDDSGGNSVK EKDIDSGDDD AESESNEKKD GHKRSFPGGL DSTGRSHAAA 180 SHHHPHHVRS VSMDSVLSSF QNSENPNQKP APSPTGRNIK HFHSNSMDGS INFKLEFGNG 240 EFSGPELNKI MSNEKLAEIA MTDPKRAKRI LANRQSAARS KERKMRYISE LERKVQTLQT 300 EATTLSAQLT LLQRDSMGLT NENNELKLRL QAMDQQAQLR DALNEALSEE VQRLKLATGQ 360 SISINSHLFQ LQQQGPHVAV HQLQQQQQHQ QQHQQQVTNS QQSPGHQTNQ NEVLQNTYGA 420 FPGSLGSFLK SDGSNIPASQ GSNCSF

Sequence ? help Back to Top

Protein Sequence Length: 446 aa Download sequence Send to blast

MDEHPIPSPR PPVSPFSADS HSRPDASRTG DVLPPRKGGH RRAHSEIPRQ VSWDKVGKGV  60
KKEAEWDRDG DLNMEVGDGE DLFSMYIDLD KLNTLNTTSS ANPADIGEGS GESGRKTLNA  120
DDDNEDDKAG PDDSGGNSVK EKDIDSGDDD AESESNEKKD GHKRSFPGGL DSTGRSHAAA  180
SHHHPHHVRS VSMDSVLSSF QNSENPNQKP APSPTGRNIK HFHSNSMDGS INFKLEFGNG  240
EFSGPELNKI MSNEKLAEIA MTDPKRAKRI LANRQSAARS KERKMRYISE LERKVQTLQT  300
EATTLSAQLT LLQRDSMGLT NENNELKLRL QAMDQQAQLR DALNEALSEE VQRLKLATGQ  360
SISINSHLFQ LQQQGPHVAV HQLQQQQQHQ QQHQQQVTNS QQSPGHQTNQ NEVLQNTYGA  420
FPGSLGSFLK SDGSNIPASQ GSNCSF

Expression -- UniGene ? help Back to Top
UniGene ID	E-value	Expressed in
Psi.13628	0.0	shoot

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_006852991.1	1e-105	probable transcription factor PosF21 isoform X1
Refseq	XP_011626470.1	1e-105	probable transcription factor PosF21 isoform X2
TrEMBL	B8LQ18	0.0	B8LQ18_PICSI; Uncharacterized protein
STRING	ERN14458	1e-105	(Amborella trichopoda)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38900.3	5e-66	bZIP family protein