PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Psi006489 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family | bZIP | ||||||||
Protein Properties | Length: 456aa MW: 49544.1 Da PI: 8.0387 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 31.1 | 5e-10 | 260 | 318 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 kr++r NR +A rs +RK +i eLe++v++L++e ++L +l +l+ l++e+ Psi006489 260 KRAKRILANRQSAVRSKERKMRYISELERRVQTLQTEATTLSAQLTMLQRDTTGLTTEN 318 9*********************************************9998877777665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.9E-16 | 256 | 320 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.001 | 258 | 321 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.6E-10 | 260 | 314 | No hit | No description |
SuperFamily | SSF57959 | 4.71E-11 | 260 | 312 | No hit | No description |
Pfam | PF00170 | 1.3E-8 | 260 | 317 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14703 | 5.81E-23 | 261 | 310 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 456 aa Download sequence Send to blast |
MATANAPKNT TGNSLGNPSQ SQQVQQARYV GYPSSTNAFT LTREAKPALS DSSGNSMVMD 60 VTMQEPVSSS GAVGVTEPRN LGPSQNFSTD VSRMPDVPPR RGGHRRAQSE IAFRLPDDIM 120 FDGDLGFSGF DMPTVSDDAT EAEDLISMYM DMEKLTSFGE PLNAVAGEGS KLPLGADTNR 180 APHHSRSLSV DAVFSGLESD LEGTRGNLGS AGPSRPRHRH SNSMDGSSSL QINQLSSESL 240 ETKKAMAAKK LQELALIDPK RAKRILANRQ SAVRSKERKM RYISELERRV QTLQTEATTL 300 SAQLTMLQRD TTGLTTENNE LKLRLQSMEQ QAQLRDALNE TLREKVQRMK IATGQLSSNN 360 ANAFNMSATA QQLPLNRSFF SPTQHSHRLN QQFQSFQHPP SAMNNQPLMG QSQVHQNFPQ 420 YGSAGQLQGL MGSQGGPAVE SEVSSGSVNH PASSSF |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Psi.14506 | 0.0 | shoot |
Expression -- Description ? help Back to Top | ||||||
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Source | Description | |||||
Uniprot | DEVELOPMENTAL STAGE: Expressed constitutively at a low level in young seedlings and in roots, stems and leaves of mature plants. |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Putative transcription factor with an activatory role. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024404099.1 | 1e-127 | transcription factor RF2a-like | ||||
Swissprot | Q04088 | 3e-80 | POF21_ARATH; Probable transcription factor PosF21 | ||||
TrEMBL | B8LLI3 | 0.0 | B8LLI3_PICSI; Uncharacterized protein | ||||
STRING | PP1S20_116V6.1 | 1e-126 | (Physcomitrella patens) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G06070.1 | 6e-84 | bZIP family protein |
Publications ? help Back to Top | |||
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