PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||||||
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TF ID | Psi005375 | ||||||||||||
Organism | |||||||||||||
Taxonomic ID | |||||||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family | bZIP | ||||||||||||
Protein Properties | Length: 163aa MW: 18949.5 Da PI: 9.1905 | ||||||||||||
Description | bZIP family protein | ||||||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 44.8 | 2.8e-14 | 59 | 117 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 ++++r+ +NRe+ArrsR RK++ ++eL+ v +L aeN ++ + ++++ +++ ++ Psi005375 59 RKQKRMLSNRESARRSRMRKQQHMDELRAQVVQLRAENNHILSKFNIASQHYLQVEEQN 117 79***************************************999999999998888776 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 6.8E-10 | 49 | 102 | No hit | No description |
SMART | SM00338 | 4.4E-17 | 55 | 119 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.806 | 57 | 120 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.62E-12 | 59 | 111 | No hit | No description |
Pfam | PF00170 | 7.5E-11 | 59 | 116 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 2.15E-18 | 60 | 110 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 62 | 77 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 163 aa Download sequence Send to blast |
XKSSDVQVVM GRRVVFDXEG GKVGTSSYGS CPPSSSHSGS EEEQQEQQQE QKKNVIDERK 60 QKRMLSNRES ARRSRMRKQQ HMDELRAQVV QLRAENNHIL SKFNIASQHY LQVEEQNRVL 120 RSQAIDLYQK LQVLISMQQQ QQQQQQQSLG NFDNLEFQNS GFC |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 71 | 78 | RRSRMRKQ |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024392804.1 | 1e-30 | basic leucine zipper 63-like | ||||
Refseq | XP_024392805.1 | 1e-30 | basic leucine zipper 63-like | ||||
Refseq | XP_024392806.1 | 1e-30 | basic leucine zipper 63-like | ||||
Refseq | XP_024392808.1 | 1e-30 | basic leucine zipper 63-like | ||||
TrEMBL | A0A0C9S879 | 1e-40 | A0A0C9S879_9SPER; TSA: Wollemia nobilis Ref_Wollemi_Transcript_5460_974 transcribed RNA sequence | ||||
STRING | PP1S158_113V6.1 | 5e-30 | (Physcomitrella patens) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75390.1 | 7e-27 | basic leucine-zipper 44 |