PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Psi004822
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family bZIP
Protein Properties Length: 195aa    MW: 21613.5 Da    PI: 9.184
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Psi#S38861867PU_refUnigeneView CDS
PUT-183a-Picea_sitchensis-18390PU_unrefplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_141.23.5e-13116170155
                XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 
                +ke kr +r+ +NR++A+  R+RKka++ eLe+k+ eL+++N++L +++++l++e
  Psi004822 116 DKEHKRLKRLLRNRVSAQQARERKKAYLNELETKANELQQKNSELEERVSTLQNE 170
                5899***********************************************9986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.5E-15116180IPR004827Basic-leucine zipper domain
PfamPF001701.3E-11117176IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.725118181IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.69E-13120178No hitNo description
Gene3DG3DSA:1.20.5.1701.6E-16120180No hitNo description
CDDcd147047.54E-19121171No hitNo description
PROSITE patternPS000360123138IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    Send to blast
XGCKGRSDYL NLVRGFSLRS ASDGTTISEN XKMQATAPDF SGSVTGDKLI TSSSGDPHEE  60
AMNECVNESD DDIRRVPEMG VQTGFVVHSD LAVKTESERA SASGGSQRRR GRTPADKEHK  120
RLKRLLRNRV SAQQARERKK AYLNELETKA NELQQKNSEL EERVSTLQNE NFMLRQVLKN  180
MTAKNKGGGF VEAEG
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that promotes photomorphogenesis in the light and positively regulates fruit pigmentation and fruit nutritional quality. Probably acts downstream of the light receptor network and directly affects transcription of light-induced genes. {ECO:0000269|PubMed:15178762}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021758181.13e-48transcription factor HY5-like
SwissprotQ9SM501e-43HY5_SOLLC; Transcription factor HY5
TrEMBLA9NZF51e-114A9NZF5_PICSI; Uncharacterized protein
STRINGXP_010670652.12e-46(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11260.15e-35bZIP family protein
Publications ? help Back to Top
  1. Wang F, et al.
    Light Signaling-Dependent Regulation of Photoinhibition and Photoprotection in Tomato.
    Plant Physiol., 2018. 176(2): p. 1311-1326
    [PMID:29146776]
  2. Liu CC, et al.
    The bZip transcription factor HY5 mediates CRY1a-induced anthocyanin biosynthesis in tomato.
    Plant Cell Environ., 2018. 41(8): p. 1762-1775
    [PMID:29566255]