PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||||||
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TF ID | Psi003882 | ||||||||||||
Organism | |||||||||||||
Taxonomic ID | |||||||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family | WRKY | ||||||||||||
Protein Properties | Length: 242aa MW: 27314.4 Da PI: 7.1635 | ||||||||||||
Description | WRKY family protein | ||||||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 97.5 | 8.5e-31 | 141 | 198 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYG+K+vk+s++prsYYrC+ ++C+vkk+ver+ +d+ ++++tYeg+Hnhe Psi003882 141 EDGYKWRKYGRKVVKSSPHPRSYYRCSDNNCSVKKRVERDPSDQGLLITTYEGTHNHE 198 8********************************************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 1.7E-32 | 127 | 200 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 2.09E-27 | 133 | 200 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 30.331 | 135 | 200 | IPR003657 | WRKY domain |
SMART | SM00774 | 4.7E-33 | 140 | 199 | IPR003657 | WRKY domain |
Pfam | PF03106 | 1.0E-24 | 141 | 198 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 242 aa Download sequence Send to blast |
XLDPFNSLLW YNPMAANALS AFNQEFNIHP QPPVEGQKIE KDVWTQFLVE DKGSDKNDKQ 60 EMKTECMANS PAAQSARSQE DQHSEICNVE EHLSEVSDGN ANKTSVDGDI ADSKIIKKRK 120 IKTEKGPRYA FKTRSETDVL EDGYKWRKYG RKVVKSSPHP RSYYRCSDNN CSVKKRVERD 180 PSDQGLLITT YEGTHNHESP SVIYYIGKPI ILPQQGSKPA IVLVNATLCP EPVLNYAAHQ 240 AL |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1wj2_A | 1e-24 | 130 | 201 | 7 | 78 | Probable WRKY transcription factor 4 |
2lex_A | 1e-24 | 130 | 201 | 7 | 78 | Probable WRKY transcription factor 4 |
Search in ModeBase |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A0D6RB88 | 7e-83 | A0A0D6RB88_ARACU; Uncharacterized protein |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G64810.1 | 1e-33 | WRKY DNA-binding protein 51 |