PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | model.Picochlorum_contig_108.g629.t1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Trebouxiophyceae incertae sedis; Picochlorum
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Family | YABBY | ||||||||
Protein Properties | Length: 193aa MW: 21424.5 Da PI: 6.0255 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 25.1 | 5.4e-08 | 65 | 160 | 17 | 108 |
YABBY 17 fCntilavsvPstslfk...vvtvrCGhCtsllsvnlakasqllaaeshldeslkee............llee 74 C +l v vP + + +rC C +llsv+l ++++ +++l+ +++ + model.Picochlorum_contig_108.g629.t1 65 ECASLLRVMVPESVHRLappSLVIRCAGCGKLLSVSLPAETYIQHRTKQLQMMQEKQdqlkqlqlleqeI--- 134 4999*******8765431225789***************9999998888887654444445455433333... PP YABBY 75 lkveeenlksnvekeesastsvsseklsenedee 108 +++ + e++++s ++++++e++++ model.Picochlorum_contig_108.g629.t1 135 --------QQKRKFLEEQMKSFQANTVEEKDTNR 160 ........44444444444333333332222211 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04690 | 1.8E-5 | 65 | 161 | IPR006780 | YABBY protein |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0007275 | Biological Process | multicellular organism development |
Sequence ? help Back to Top |
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Protein Sequence Length: 193 aa Download sequence Send to blast |
MLGGYSKTEQ HMHPGNAAVD ISVRAGTADA QNVAAGMMSQ KQQIELILRS CMEPMEINVA 60 CENPECASLL RVMVPESVHR LAPPSLVIRC AGCGKLLSVS LPAETYIQHR TKQLQMMQEK 120 QDQLKQLQLL EQEIQQKRKF LEEQMKSFQA NTVEEKDTNR QSGSHRAEDQ EEALVTPVLQ 180 RGLKPSESPE SA* |