PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.8G267900.8.p
Common NamePRUPE_ppa000864mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family HB-other
Protein Properties Length: 344aa    MW: 37900.1 Da    PI: 6.028
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.8G267900.8.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox14.27.6e-05109169154
                         TT--SS--HHHHHHHHHHHHHSSS-..-HHHHHHHHHHC.....TS-HHHHHHHHHHHHHH CS
            Homeobox   1 rrkRttftkeqleeLeelFeknryp..saeereeLAkkl.....gLterqVkvWFqNrRak 54 
                         +rkRt ++++q+e  e++   ++ +  +a++++  A+kl     ++t  q k+W  Nr+a+
  Prupe.8G267900.8.p 109 KRKRTIMNDTQVELIERALLDEPDMqrNAASIQSWAEKLsfhgsEVTCPQLKNWLNNRKAR 169
                         79*****************986665226789*****************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.6E-496172IPR009057Homeodomain-like
PROSITE profilePS5007110.171106173IPR001356Homeobox domain
SMARTSM003890.0018108177IPR001356Homeobox domain
CDDcd000869.76E-4109173No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    Send to blast
MSENSAFQDV DQVDANSEHM DQGNDVMRED KGISGGSASG RFGAIDLDAH NVETSGSDTS  60
STRGKNAVDQ MENSEFPKPS AHIKESGYGG TAEDEKVETV QCEEKQRRKR KRTIMNDTQV  120
ELIERALLDE PDMQRNAASI QSWAEKLSFH GSEVTCPQLK NWLNNRKARL ARTAKDVRPA  180
PEADNALQDK QGGRGLRSNN SPDTPGGDAS SQLNVRRDHQ IMLRTGIREI SETNVAEAAA  240
PRGPAEFDLC KQGDSIGLMG ANGEEIGRGK VFQVRGQWYG RNLEELRAYV VDVKDLKARR  300
ATRLPHPSVA TGVSFEEAET KIGVMRVLWD SNMTFTLRPK RAM*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1106111RRKRKR
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.8G267900.8.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020425956.10.0nodulin homeobox
RefseqXP_020425967.10.0nodulin homeobox
TrEMBLA0A251N3430.0A0A251N343_PRUPE; Uncharacterized protein
TrEMBLA0A251N3Y90.0A0A251N3Y9_PRUPE; Uncharacterized protein
STRINGXP_008234967.10.0(Prunus mume)