PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.8G225900.4.p
Common NamePRUPE_ppa001930mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 433aa    MW: 47918.1 Da    PI: 5.4549
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.8G225900.4.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH130.00022612981355
                         HHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
                 HLH  13 RdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                         R+ i +++ eLrel+P+ a      K s  + Le++++++  Lq
  Prupe.8G225900.4.p 261 RQLIQDRIKELRELIPNgA------KCSIDSLLERTIKHMLFLQ 298
                         77899************77......7777779999999999998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474596.15E-5241303IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088811.128248297IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.9E-4261305IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 433 aa     Download sequence    Send to blast
MASMIYSNPL SHGSVQENVN LCDSADLSAT FLNSAAHGRV NVDRVDFYQN EVLQVSEPSD  60
VKFQKDLENL DFQTESGHMD TSSTSMAFPA GCELHEALGP AFLNKGNYFD WEAEKNGDGI  120
TIEMPEGMKT GQLTSDSCQE HLLEAVVANV CHSGTDVKSE KSFCKSMQSL LTTEKYPEPS  180
SHTTHTIDSE NYSIDQPSLI AEDTQQCLSS SGVCGVISPK WFSSPCPSAC SEQLERSSGP  240
SKNNKKRARP GENSRPRPRD RQLIQDRIKE LRELIPNGAK CSIDSLLERT IKHMLFLQSI  300
TKHADKLNKC ADAKLCHKEA SMLGSSNYER GSSWAVEVGG NLKVCSIMVE NLNKNGQMVV  360
EMMCEECSHF LEIAEAIRSL GLTILKGVTE ARSDKTWICF VVEGQNNRSI HRMDILWSLV  420
QILQPKNPMQ QL*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ppe.26040.0fruit
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that may regulate root development. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.8G225900.4.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHF9687650.0HF968765.1 Malus x domestica metacontig of the Co-Gene region, cultivar Procats28, columnar allele.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020425713.10.0transcription factor bHLH155 isoform X2
SwissprotP0C7P81e-120LHWL1_ARATH; Transcription factor EMB1444
TrEMBLA0A251N1W90.0A0A251N1W9_PRUPE; Uncharacterized protein
STRINGXP_008235701.10.0(Prunus mume)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31280.11e-120conserved peptide upstream open reading frame 7