PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.8G224700.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 180aa MW: 20470.7 Da PI: 6.5182 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.3 | 4.3e-19 | 47 | 99 | 1 | 56 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 ++y+G+r+++ +g+++AeIrdps ng +r +lg+f taeeAa+a+++a+ ++g+ Prupe.8G224700.1.p 47 TRYRGIRRRP-WGKFAAEIRDPSRNG--ARLWLGTFETAEEAARAYDRAAFGFRGH 99 68********.**********98887..**********************988886 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF00847 | 3.9E-13 | 47 | 99 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 5.73E-31 | 47 | 108 | No hit | No description |
PROSITE profile | PS51032 | 24.869 | 48 | 106 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 1.1E-30 | 48 | 107 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 5.0E-35 | 48 | 113 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 6.54E-23 | 48 | 107 | IPR016177 | DNA-binding domain |
PRINTS | PR00367 | 2.1E-11 | 49 | 60 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 2.1E-11 | 72 | 88 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 180 aa Download sequence Send to blast |
MHYISCMSQA QPIFLPPNLN KDLFLLNMEG KGVENQQKEQ TKVRDQTRYR GIRRRPWGKF 60 AAEIRDPSRN GARLWLGTFE TAEEAARAYD RAAFGFRGHL AILNFPNDYQ YHNPSSSLIS 120 TSSSSSSSPF SAADIGKSTN FGRGQEEEEV IEFEYLDNMV LEELLDTKED HHRQGKPTH* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5wx9_A | 9e-29 | 45 | 160 | 11 | 114 | Ethylene-responsive transcription factor ERF096 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.8G224700.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_007199104.1 | 1e-110 | ethylene-responsive transcription factor ERF098 | ||||
Swissprot | Q9LTC5 | 2e-46 | ERF98_ARATH; Ethylene-responsive transcription factor ERF098 | ||||
TrEMBL | A0A251N1U9 | 1e-132 | A0A251N1U9_PRUPE; Uncharacterized protein | ||||
STRING | EMJ00303 | 1e-110 | (Prunus persica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF270 | 33 | 215 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23230.1 | 3e-37 | ERF family protein |
Link Out ? help Back to Top | |
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Phytozome | Prupe.8G224700.1.p |
Publications ? help Back to Top | |||
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