PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.8G137800.3.p
Common NamePRUPE_ppa023106mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family HB-PHD
Protein Properties Length: 1049aa    MW: 114948 Da    PI: 4.629
Description HB-PHD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.8G137800.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox40.45e-13882926852
                         -HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHH CS
            Homeobox   8 tkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrR 52 
                          +  +++L + F++n+yp+++++e LA++lgL  +qV+ WF N R
  Prupe.8G137800.3.p 882 GEAATQRLCKSFKENHYPDRSMKESLARELGLMAKQVSKWFENAR 926
                         567899*************************************99 PP
2PHD37.84.5e-13505560151
                         SBTTTSS..TCTTSSEEEBSS.SSSEEETTTSTSSSSHHSHHSS..TBSSHHHHTT CS
                 PHD   1 rCkvCgk..sdeegelvlCdg.CkewfHlkClglkleseekpeg..ewlCeeCkek 51 
                         +C  Cg+     +++++lCdg C++ fH+ Cl+++l se++p +   wlC+ C++k
  Prupe.8G137800.3.p 505 FCGKCGSkdVSLDNDIILCDGaCDRGFHQFCLEPPLLSEDIPPDdeGWLCPGCDCK 560
                         699999964444********66*******************99999*******985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF579032.21E-13495563IPR011011Zinc finger, FYVE/PHD-type
Gene3DG3DSA:3.30.40.101.4E-12501560IPR013083Zinc finger, RING/FYVE/PHD-type
PROSITE profilePS5001611.056503560IPR019787Zinc finger, PHD-finger
SMARTSM002491.5E-9505558IPR001965Zinc finger, PHD-type
CDDcd155049.44E-27505557No hitNo description
PfamPF006282.1E-10505560IPR019787Zinc finger, PHD-finger
PROSITE patternPS013590506557IPR019786Zinc finger, PHD-type, conserved site
Gene3DG3DSA:1.10.10.603.3E-14849927IPR009057Homeodomain-like
PROSITE profilePS5007113.426872932IPR001356Homeobox domain
SuperFamilySSF466893.17E-11873935IPR009057Homeodomain-like
SMARTSM003895.4E-10874936IPR001356Homeobox domain
CDDcd000861.50E-10875926No hitNo description
PfamPF000461.6E-10882926IPR001356Homeobox domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005515Molecular Functionprotein binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 1049 aa     Download sequence    Send to blast
MADAAQLDIP PECVSSQTAK CQEESTSGQI HEIGSESQCS EKTKENIGCK VVQNELLEIC  60
KASNNPDEQS QSFSENLTEN SHVENLGLPA EDVDKSSQNG AQNVTKNSLT EQLEMPREDP  120
DVNNQSDKTS CSGQMSLEQT NDSGFGTSSS EPAEERHPSG SFCVQNELLQ TIMPLPICGG  180
SEQVQPISEN VNMASLNDQA GLPPEDVSKT CQTQKISCPH QITSHQINEF GSGSVPSEPA  240
KQKDQLDSVP AQNDEAKTSK AVSSSTVFEQ PGPSIEAMTE DSPIGHSEPP LEDLSKSLSD  300
KEMEPLPEDV TQNSSLQQLE TASKNALKIS SCLGPKDKKN PKSRKRKYMS RSFVRSDRVL  360
RSKTGEKEKP KDLKLSNNVA TLESSNSIAN VSNGEEKKRK KRKNRRDNRA IADEFSRIRT  420
HLRYLLNRIG YEKSLIDAYS GEGWKGSSLE KLKPEKELQR ATSEILRRKL KIRDLFQRLE  480
SLCAEGMFPE SLFDSEGQID SEDIFCGKCG SKDVSLDNDI ILCDGACDRG FHQFCLEPPL  540
LSEDIPPDDE GWLCPGCDCK VDCIDLLNDS QGTDLSVTDS WEKVFPEAAA AASAGENQDN  600
HGLPSDDSDD NDYDPDGPET DNKVQGEESS SDESEYASAS DGLETPKSND EQYLGLPSED  660
SEDDDYNPYA PDVNEDVKQE SSSSDFTSDS EDLGAALDDN IMSSEDVEGP KSTSLDDSKP  720
HRGSGEQSSI SGQKKHSLKD ELISLLESGP GQGESAPLSG KRHIERLDYK RLHDAYGNVP  780
TDSSDDEDWN DIATQRKRKK GTGQVANRSP NGKTSNIKNG VITKDIKPDV DENENTPRRM  840
PHRKSNVEDT SNLSNKSPKG STKSGSTSGR AGSSRSTYSR LGEAATQRLC KSFKENHYPD  900
RSMKESLARE LGLMAKQVSK WFENARHCLK VGVDKSASEN CAPPPQTNRR QLEQGDAIVG  960
DSDHNGAQNK ELHGTDDPMI GCCSRDVMDS ELATLGSSRS KLSTPNNRKR KRRSDDPDPK  1020
TETPTPPAEP ETNRKPSRVM TRRRKSVS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1396402KKRKKRK
2397405KRKKRKNRR
3795799RKRKK
410071012RKRKRR
510401045TRRRKS
Functional Description ? help Back to Top
Source Description
UniProtSpecifically binds to the fungal elicitor-responsive DNA element, 5'-CTAATTGTTTA-3', of the gene PR2 promoter.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.8G137800.3.p
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By pathogen infection.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020425610.10.0homeobox protein HAT3.1
SwissprotP487861e-134PRH_PETCR; Pathogenesis-related homeodomain protein
TrEMBLA0A251MXJ40.0A0A251MXJ4_PRUPE; Uncharacterized protein
STRINGEMJ012570.0(Prunus persica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19510.14e-96Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain