PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.8G122700.2.p
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 355aa    MW: 39755.5 Da    PI: 5.6952
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.8G122700.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B348.91.2e-1544133299
                         EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
                  B3   2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                         +kv++ps+v+   +l lpkkf+ +h +k  ++++++lede+g+++e k+     +  + l++GW++F  +++L e D+v+++++  s+f  
  Prupe.8G122700.2.p  44 LKVMLPSHVTGCFWLGLPKKFCCDHLLK--QDTMIVLEDENGEEFETKY--LAEK--VGLSGGWRGFSMSHKLLEEDIVILHVVTPSKF-- 126
                         699**********************887..7789***************..4444..55***********************8876888.. PP

                         EEEEE-S CS
                  B3  93 vvkvfrk 99 
                         +v ++r+
  Prupe.8G122700.2.p 127 KVYIIRS 133
                         8888876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.40.330.102.9E-1735134IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019361.16E-2036135IPR015300DNA-binding pseudobarrel domain
CDDcd100171.83E-2241132No hitNo description
SMARTSM010193.2E-1543134IPR003340B3 DNA binding domain
PROSITE profilePS5086310.88443134IPR003340B3 DNA binding domain
PfamPF023627.7E-1444133IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 355 aa     Download sequence    Send to blast
MPESRKLKRA TVESLYDTSQ AQSSVLQRAK EVEASLDPKF PTLLKVMLPS HVTGCFWLGL  60
PKKFCCDHLL KQDTMIVLED ENGEEFETKY LAEKVGLSGG WRGFSMSHKL LEEDIVILHV  120
VTPSKFKVYI IRSNGLDEAD CAVGLTRLDA GIKQMDTGHI ISCVREESGN LEPIPEDYAI  180
AFNTKSRPLS DQSENDSEDL GFEVLDGLRL SESVVPFKEM YRMDNFNVLV NGLNINSEFS  240
KYVLNKYYEL CCSQNSFLHE HLLEGLNCKL IVGVTSETIN IADAIRACKI TTSEGYFSTW  300
NKTLIAFEGL GMNVGFLRAR LDQLAILASK SKGFKEARLE ELRGKAFGSK RDHK*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.8G122700.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008236526.10.0PREDICTED: B3 domain-containing protein Os01g0234100-like
TrEMBLA0A251MWR80.0A0A251MWR8_PRUPE; Uncharacterized protein
STRINGXP_008236526.10.0(Prunus mume)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.12e-37B3 family protein