PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.8G091800.3.p
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 732aa    MW: 80638.4 Da    PI: 4.6953
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.8G091800.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding21.55.4e-07588631246
                         SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
     Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                          rW++++ el++ a++q G++ ++ I +    gRt+ q+k+++ k
  Prupe.8G091800.3.p 588 VRWSKQDTELFYGAIQQCGSD-FTMIQELYFPGRTRHQIKLKFKK 631
                         69*******************.*****98766**********986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF159639.3E-27580667No hitNo description
SMARTSM007172.1E-4586635IPR001005SANT/Myb domain
SuperFamilySSF466892.69E-9589637IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.605.1E-5589631IPR009057Homeodomain-like
CDDcd001671.71E-4589631No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 732 aa     Download sequence    Send to blast
MEDLDDIFLD PSNAPARPGG RFRPKAKPRP SKVASTAATS ALPNDRTEKP ATLSPTVSDT  60
VPSVKSIDVG DVKVTDPVGS SLATSEILGN IEPAKNNENL CTNVASSDGN KDTKPCESAA  120
TAAPQPEVAA SVGTAAGENA DIFSGLECLD GFLSQTTRGT AESAASKPHV SAESSAFMVC  180
DVAEAQTFSD CCTTQDPVSC REVSVSNKPD EVQLETKVDG AFSEFEVLDV VSDATILSGQ  240
RVGKFQPKLK VKKGKEHLHI PPAEVECMLS QAVLVPSETD MNESSLPAFP PGHVLDHPSP  300
RFGDSSTPHP TSDPLVNTEY IAETTHLDGA IFGDAVRSED VGGTLGKEGH KSRNRKGSTA  360
SNHSQKHKSF AASEEAEGGT SSRKLRKRLP RQEVEELVHE ANEDSFTAEP SSGSNVNEDE  420
NNDNEYREHK TSQRKRAPRK SKEPESGKEE PVKKRKRAKE APDKSTKDPP KRFSHSTRRT  480
KRHVDKSLLE IPEDEIDHQS LSLKNLIRLA EHRELLAIKE ARKMTTPVPD ESTNNDSHKE  540
ANHDEENEEE TFPSEQDRNS EENQASYRVN ASSFLLNYQS YMDKTPTVRW SKQDTELFYG  600
AIQQCGSDFT MIQELYFPGR TRHQIKLKFK KEERQNPLRI NEAVLSRSTC STDHSQFTSY  660
IERLQQVAQA NKEEEAEPTH DTDEGVKKTE LEEPEDQEAD VAEVQEEAVD AEVENPLKSD  720
EIDDEEFTWS E*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1433455RKRAPRKSKEPESGKEEPVKKRK
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.8G091800.3.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007201417.20.0transcription factor TFIIIB component B'' homolog isoform X1
RefseqXP_020409362.10.0transcription factor TFIIIB component B'' homolog isoform X1
RefseqXP_020409363.10.0transcription factor TFIIIB component B'' homolog isoform X1
RefseqXP_020409364.10.0transcription factor TFIIIB component B'' homolog isoform X1
TrEMBLA0A251MVG30.0A0A251MVG3_PRUPE; Uncharacterized protein
STRINGXP_008364966.10.0(Malus domestica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39160.11e-41MYB_related family protein