PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.8G031500.2.p
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bZIP
Protein Properties Length: 316aa    MW: 34688 Da    PI: 6.9742
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.8G031500.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_143.28.4e-14234290459
                         XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.HHHH CS
              bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke.vakl 59 
                          +r+rr++kNRe+A rsR+RK+a++ eLe  +  Le+eN++L ke  e ++e  ++l
  Prupe.8G031500.2.p 234 QQRQRRMIKNRESAARSRERKQAYQVELESLAVRLEEENEQLLKEKTERTEErRKQL 290
                         58***************************************8776555554404444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.0E-9231295IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.726233285IPR004827Basic-leucine zipper domain
PfamPF001704.4E-12234291IPR004827Basic-leucine zipper domain
CDDcd147073.70E-17235277No hitNo description
Gene3DG3DSA:1.20.5.1702.4E-11236287No hitNo description
SuperFamilySSF579597.8E-9236284No hitNo description
PROSITE patternPS000360238253IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0016021Cellular Componentintegral component of membrane
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    Send to blast
MASSKLVSSS SRSRNSDLSR RPSSNSPATK PKPSATPSSS SAHPQTLNNH SNGISDYHST  60
NTTSSMPIGS MTIDGLLYDP NPTPMTDATL LDAQITLINT DAAAEMNSSS AAVPQKTVDE  120
VWREIVSGEA RKGCKEEVPD DLMTLEDFLA RAGAVEEDDI KDMPLAMPPP ETERLSGGVF  180
SFDPMPQLSP FSSIDKVEGS IIGFGNGVEM VGSGGVGRGK RGRAVLEPMD KVAQQRQRRM  240
IKNRESAARS RERKQAYQVE LESLAVRLEE ENEQLLKEKT ERTEERRKQL MEKVIPVVEK  300
RRPARALRRV HSLQW*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ppe.162272e-51fruit
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.8G031500.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2535380.0AC253538.1 Prunus persica cultivar Lovell clone JGIBIXB-13C4, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020426092.10.0G-box-binding factor 4
TrEMBLA0A251MS420.0A0A251MS42_PRUPE; Uncharacterized protein
STRINGXP_008237569.10.0(Prunus mume)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44080.18e-50bZIP family protein