PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.8G014900.1.p | ||||||||
Common Name | PRUPE_ppa019160mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | FAR1 | ||||||||
Protein Properties | Length: 665aa MW: 77414.9 Da PI: 7.6758 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 59.8 | 8.4e-19 | 42 | 128 | 1 | 91 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fY++YA++vGF ++k++skk + ge + t+ Cs++g ++++ ++ ++ ++ +++Cka+l+ dg+w+v++++l+HnH l+p Prupe.8G014900.1.p 42 DFYKKYANRVGFPMKKRSSKKG-DFGELKYVTLSCSRSGIPQSTASN---VLKPYPSIKCNCKAQLRAGICLDGRWKVNSVKLDHNHGLNP 128 6***************998887.8888****************9888...8999*********************************9975 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF03101 | 9.3E-16 | 42 | 128 | IPR004330 | FAR1 DNA binding domain |
Pfam | PF10551 | 8.1E-37 | 249 | 342 | IPR018289 | MULE transposase domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 665 aa Download sequence Send to blast |
MSEENDEVEI GETGLEKTMS PEETTQEPKV NMIFNTVDEV LDFYKKYANR VGFPMKKRSS 60 KKGDFGELKY VTLSCSRSGI PQSTASNVLK PYPSIKCNCK AQLRAGICLD GRWKVNSVKL 120 DHNHGLNPNN ARYFRMNRAI SSYMKRKIEV NDRAGIRVNK NYNSMVVEAG GHENMSFMEK 180 DCRNYINKVR RLQLGEGDAT AIQKYFLKMQ AQNANFFYAI DLDESGRLRN VFWADSRSRA 240 AYEEFGDAIT FDTTYLTNKY DMPFAPFVGV NHHGHSILLG CGLISSEDTD TFVWLFKVWL 300 ACMSGLAPCG IITDQDRAMK NAIEIVFPNT RHRWCLWHIM KKLHEKLKSY KHYESIKFAL 360 ENIVYDSLTN IEFEDRWKEM IEKYELQSND WLRGLYDERR RWVPSFVKGS FWAGMSTTQR 420 SESMNAFFDD HVNSKTTLKQ FVEQYENALM TKVEKENQAD YKSSSADIQC STHYFMEKQA 480 QGVYTIAKFK EFQNELTSKM YCEVVDTKED GAFLKYQISE DMIIAGKKKS VNFTVIFHEF 540 DSEVKCNCSK FEFRGILWRH AIYFLIKHKM DLIPDKYILR RWRKDVTRRH TKIKISYNES 600 NATLEAHQCD KMQKTFDEIK ELAADSEEKC VIVMAWMQKL KEQLSNHDND SQNAQDSHGG 660 MDDD* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.8G014900.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_007199084.2 | 0.0 | protein FAR-RED IMPAIRED RESPONSE 1 | ||||
TrEMBL | A0A251MR68 | 0.0 | A0A251MR68_PRUPE; Uncharacterized protein | ||||
STRING | EMJ00283 | 0.0 | (Prunus persica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF40 | 30 | 530 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G15090.1 | 1e-128 | FAR1 family protein |
Link Out ? help Back to Top | |
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Phytozome | Prupe.8G014900.1.p |
Entrez Gene | 18767157 |