PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.7G233800.3.p
Common NamePRUPE_ppa003211mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family CPP
Protein Properties Length: 592aa    MW: 62900.7 Da    PI: 7.7016
Description CPP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.7G233800.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCR41.91.9e-13119158242
                 TCR   2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42 
                         ++k+CnCk+s+Clk+YCeCfa+g +C+  C+C +C+N+ e+
  Prupe.7G233800.3.p 119 KQKQCNCKHSRCLKLYCECFASGIYCDG-CNCVNCCNNVEN 158
                         89**************************.********9875 PP
2TCR512.8e-16202241140
                 TCR   1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 
                         k++kgC+Ckks ClkkYCeCf+a+  Cse+CkC dCkN e
  Prupe.7G233800.3.p 202 KHNKGCHCKKSGCLKKYCECFQANILCSENCKCIDCKNFE 241
                         589***********************************65 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM011144.6E-15118158IPR033467Tesmin/TSO1-like CXC domain
PROSITE profilePS5163436.058119242IPR005172CRC domain
PfamPF036384.2E-10120155IPR005172CRC domain
SMARTSM011143.5E-20202243IPR033467Tesmin/TSO1-like CXC domain
PfamPF036386.2E-13205240IPR005172CRC domain
Sequence ? help Back to Top
Protein Sequence    Length: 592 aa     Download sequence    Send to blast
MGEADGDESA PTKGQSDAAT AATTSSSSSM SDVPAKKLAR QLDFTGFGGT PASVAVPELP  60
KPQLPTVSVQ QSQPKPPVVA VPVPVPPQPP IPSVRPVKPE SPKSRPRPNV DAKDGTPKKQ  120
KQCNCKHSRC LKLYCECFAS GIYCDGCNCV NCCNNVENEG ARRDAVEATL ERNPNAFRPK  180
IASSPHGPRD TREAGEVLIL GKHNKGCHCK KSGCLKKYCE CFQANILCSE NCKCIDCKNF  240
EGSEERQALF HGDHGNNMAY LQQAANAAIT GAIGSSGYAS SPPISKKRKG QELFGPTAKD  300
PSIHRIGQFQ QGNHIRPPAP SSPASVPVNR LGGTAGLGPS KFTYRSLLAD IIQPQDLKEL  360
CSVLVVVAEE AAKTLAEQRN TAEKPTETSL TSTTQDRLQS QKESEAQKAV ADDCSSANEA  420
DKISPDDSNS DGADVPKGRP MSPATLALMC DEQDTMFMSA ASPNGLMGDR CNTSSQLPNG  480
QGMTEVYAEQ ERIVLTKFRD CLNRLITFGE IKETKCSSLA RSEAETQKEQ PSNGSTNARM  540
ETGNQQGPVS NGVAKPAVPL TAKTTTPHMV AALAVSKTPS HPENGESRPK D*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5fd3_A7e-3212025111132Protein lin-54 homolog
5fd3_B7e-3212025111132Protein lin-54 homolog
Search in ModeBase
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Ubiquitous but expressed mostly in flowers. {ECO:0000269|PubMed:18057042}.
Functional Description ? help Back to Top
Source Description
UniProtPlays a role in development of both male and female reproductive tissues. {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00045PBMTransfer from AT4G29000Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.7G233800.3.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007204824.10.0protein tesmin/TSO1-like CXC 6
SwissprotQ9SZD10.0TCX5_ARATH; Protein tesmin/TSO1-like CXC 5
TrEMBLA0A251NFT60.0A0A251NFT6_PRUPE; Uncharacterized protein
STRINGEMJ060230.0(Prunus persica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29000.10.0Tesmin/TSO1-like CXC domain-containing protein