PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.7G207500.1.p
Common NamePRUPE_ppa020972mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 571aa    MW: 63793.3 Da    PI: 8.3875
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.7G207500.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.71.8e-12378422554
                         HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                 HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                         h + Er+RR+++N++f++L++llP+      +K +Ka++L+ A eY+ sL
  Prupe.7G207500.1.p 378 HMISERKRREKLNESFHTLKSLLPPG-----TKKDKASVLTTAREYLTSL 422
                         8899********************97.....8***************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000834.24E-12371427No hitNo description
PROSITE profilePS5088815.523373422IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474599.29E-17375442IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.0E-15377440IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.8E-10378422IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003539.4E-14379428IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010200Biological Processresponse to chitin
GO:0016021Cellular Componentintegral component of membrane
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 571 aa     Download sequence    Send to blast
MDTAFQLDEG SRASFLRFIM QSFGCFYICL WSYMPPPSNC LFFLDGVYDE ENQPSSSSGN  60
QARRLFDEYR LSIFNVVENE CVPGFAFRNS LPNLELQEID LQRLASSSVQ RQFYQEARIK  120
TAIFMGCKSG EIELGLSNVP QINIKRELMR NWLPEAFSRQ LSPHTAVANR PNNPDQQNPL  180
SSSSSSFRSL STMDSPEYSS ILFNIPTTTT TSHINIPEVF TQPAPIPLQP INIVTSLEPM  240
PPLNIISSSI TSPHQQALQA FSRIRNTQFP APEIEDAAMT RAILAVLSAS PSSSSSSHQP  300
PPQTNVPPSS STAHFLTPKT SAFKTYNSSP LAPRTQKSAN VRKQIMLKRS ISFLRSLNLM  360
RLREGIQATR PTSSQLHHMI SERKRREKLN ESFHTLKSLL PPGTKKDKAS VLTTAREYLT  420
SLRAQVAELS KRNQQLEARL PPAAKEAYNE VAAAAAGSSN ERVSVTLTRV VSESTPDQDQ  480
QIFDLQVVLR SVECCTEDLV IRILEFLKQV NNVSLMSMEA NTWMSGSDSN VNRVILRLRV  540
DQGTEWDEAA FQEAVRRVVA DLALNNCRNQ *
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1381386ERKRRE
2382387RKRREK
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.7G207500.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020423438.10.0putative transcription factor bHLH041
TrEMBLA0A251NGJ30.0A0A251NGJ3_PRUPE; Uncharacterized protein
STRINGEMJ049020.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41503354
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56960.13e-70bHLH family protein