PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.7G181600.2.p | ||||||||
Common Name | PRUPE_ppa011563mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | Nin-like | ||||||||
Protein Properties | Length: 207aa MW: 23685.1 Da PI: 10.0052 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 86.4 | 2.5e-27 | 79 | 128 | 3 | 52 |
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ++i l+dl+kyF+lpi +A+++L+v+lTvLK++CR++GI+RWPhRkiksl Prupe.7G181600.2.p 79 ANIALSDLAKYFDLPIVEASRNLNVGLTVLKKKCREFGIPRWPHRKIKSL 128 79**********************************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51519 | 19.327 | 63 | 148 | IPR003035 | RWP-RK domain |
Pfam | PF02042 | 2.5E-22 | 80 | 128 | IPR003035 | RWP-RK domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 207 aa Download sequence Send to blast |
MIFELSNKKP LQRSGEETCQ GSNDNNHQLI RSSPILDLDL NSLPCPVPMS ESSEDQEIGR 60 SLPGIMEKKK KRAPSEHVAN IALSDLAKYF DLPIVEASRN LNVGLTVLKK KCREFGIPRW 120 PHRKIKSLDG LIRDLQEETE IQQQENQAAA LAVAKRQRML ENEKESIERK PFLEMKTETK 180 KFRQDVFKRR HRARLLRSQG LSNSDN* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Putative transcription factor. {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.7G181600.2.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_007202579.2 | 1e-147 | protein RKD5 | ||||
Swissprot | O81791 | 6e-60 | RKD5_ARATH; Protein RKD5 | ||||
TrEMBL | M5W3E6 | 1e-149 | M5W3E6_PRUPE; Uncharacterized protein | ||||
STRING | EMJ03778 | 1e-149 | (Prunus persica) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35590.1 | 5e-51 | RWP-RK domain-containing protein |
Link Out ? help Back to Top | |
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Phytozome | Prupe.7G181600.2.p |
Entrez Gene | 18769336 |
Publications ? help Back to Top | |||
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