PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.7G144100.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | B3 | ||||||||
Protein Properties | Length: 321aa MW: 36292.3 Da PI: 9.9545 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 35.8 | 1.4e-11 | 115 | 167 | 42 | 98 |
TS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 42 sgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 s +W v++ +k ++++l+kGWk+Fv++++Lk +f+vF + g+ +f +v ++ Prupe.7G144100.2.p 115 SAGTWAVNV--KKVNDKFFLQKGWKKFVHDHDLKLCEFLVFDYAGNLGF--YVDIYG 167 3389*****..999999**************************998888..777765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.40.330.10 | 3.3E-12 | 115 | 171 | IPR015300 | DNA-binding pseudobarrel domain |
SuperFamily | SSF101936 | 2.75E-13 | 115 | 171 | IPR015300 | DNA-binding pseudobarrel domain |
Pfam | PF02362 | 1.6E-8 | 117 | 166 | IPR003340 | B3 DNA binding domain |
PROSITE profile | PS50863 | 10.828 | 118 | 169 | IPR003340 | B3 DNA binding domain |
CDD | cd10017 | 1.46E-8 | 118 | 166 | No hit | No description |
Gene3D | G3DSA:2.40.330.10 | 6.6E-9 | 245 | 301 | IPR015300 | DNA-binding pseudobarrel domain |
SuperFamily | SSF101936 | 1.41E-9 | 246 | 301 | IPR015300 | DNA-binding pseudobarrel domain |
PROSITE profile | PS50863 | 7.655 | 252 | 320 | IPR003340 | B3 DNA binding domain |
CDD | cd10017 | 5.43E-8 | 252 | 302 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 321 aa Download sequence Send to blast |
MHPLAATTGK ALALRRDIGS ESENPSFEVA MWFSYIRFAG FSLSTIISLS SLVRVSDGRT 60 WPVNKALLSP EEEEDRVQTG NRKQEKENGD GKKKPLLLQV LVGDSSNQLS HLWTSAGTWA 120 VNVKKVNDKF FLQKGWKKFV HDHDLKLCEF LVFDYAGNLG FYVDIYGRDG CKKKFVTAIR 180 EKGRRPHEEG HGNVIHRRSP RHHGKQNLPS IDPIKYEAID TESETSMHPL ATSTGETIPL 240 QRNNSFNSEK PFFKIAIQNS YIRRGYIYLP RNFVKTHLTE QRATVTLRVL DGKTWPVKLA 300 FEAVFYCKTE ASSCTSSPGK * |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.7G144100.2.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020424595.1 | 0.0 | B3 domain-containing protein At3g17010 | ||||
TrEMBL | A0A251NDI0 | 0.0 | A0A251NDI0_PRUPE; Uncharacterized protein |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G17010.1 | 8e-12 | B3 family protein |
Link Out ? help Back to Top | |
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Phytozome | Prupe.7G144100.2.p |