PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.7G134800.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | B3 | ||||||||
Protein Properties | Length: 498aa MW: 55688.1 Da PI: 7.0762 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 60.3 | 3.4e-19 | 138 | 228 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f+k l++s+v + ++ lp f+++h + +++t+tlede gr+ ++k+i k++ l++GW++F+ +++L egD++vF+l++ ++f Prupe.7G134800.1.p 138 FVKSLVRSHVASCFWMGLPSLFCKSHLPD--KDITMTLEDEGGRQCQLKYIAYKTG----LSAGWRQFAASHNLIEGDVLVFQLVEPTKF- 221 89************************644..678****************666665....9**********************9876666. PP .EEEEE-S CS B3 92 lvvkvfrk 99 +v ++r+ Prupe.7G134800.1.p 222 -KVYIIRS 228 .9998886 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.40.330.10 | 5.5E-21 | 130 | 229 | IPR015300 | DNA-binding pseudobarrel domain |
SuperFamily | SSF101936 | 1.31E-23 | 131 | 229 | IPR015300 | DNA-binding pseudobarrel domain |
CDD | cd10017 | 8.13E-28 | 136 | 227 | No hit | No description |
PROSITE profile | PS50863 | 12.703 | 138 | 229 | IPR003340 | B3 DNA binding domain |
Pfam | PF02362 | 2.5E-16 | 138 | 228 | IPR003340 | B3 DNA binding domain |
SMART | SM01019 | 6.3E-22 | 138 | 229 | IPR003340 | B3 DNA binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 498 aa Download sequence Send to blast |
MGRNVGKKET QLHQGREEKP PQTPSSKEEG HPTPAQLSKP RPRPKPNTNP KPSLLNPAKP 60 KKPNKPNEKE VEHSMPMKEL SNIQIKNMLG QAGKSPALSN TQYEYPVDGS PSRGQAKSSA 120 VIQAQEVRSK LEPRFPSFVK SLVRSHVASC FWMGLPSLFC KSHLPDKDIT MTLEDEGGRQ 180 CQLKYIAYKT GLSAGWRQFA ASHNLIEGDV LVFQLVEPTK FKVYIIRSND LTEVDGGLGL 240 LNLDSHTKRK DADKDNAETG TEACNDATRK RAHSPPSEAQ KKKKIGLQPV EQSEDDSEEV 300 DSEVLEESKS PDTALQFEDI QSFENFSILV NGLLVESELP EDVRRKYYKL CCSQNAFLHE 360 NFVEGMNHKL VVGAISETVN IADAIRACKL TTTRDDFVSW DKYLKAFELL GMNVGFLRDR 420 LCRLANLSND SGAAVEARMY KEAKIERSQA GIGIRNIEVK LEELRDMCDE FGAAIESLRS 480 KAEVYTRKFH EEVTAPW* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 268 | 283 | RKRAHSPPSEAQKKKK |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.7G134800.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_007202224.2 | 0.0 | B3 domain-containing protein Os01g0234100 | ||||
TrEMBL | A0A251ND49 | 0.0 | A0A251ND49_PRUPE; Uncharacterized protein | ||||
STRING | XP_008241504.1 | 0.0 | (Prunus mume) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1007 | 33 | 98 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G19184.1 | 7e-38 | B3 family protein |
Link Out ? help Back to Top | |
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Phytozome | Prupe.7G134800.1.p |