PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.7G134100.1.p | ||||||||
Common Name | PRUPE_ppa017002mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 267aa MW: 29255.4 Da PI: 7.9091 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 64.8 | 1.7e-20 | 122 | 171 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+W+AeIrdp+ r +r++lg+f taeeAa+a+++a+ +++g Prupe.7G134100.1.p 122 KYRGVRQRP-WGKWAAEIRDPR----RaARVWLGTFETAEEAARAYDKAAIAFRG 171 8********.**********82....48**********************99987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 1.70E-33 | 122 | 178 | No hit | No description |
SMART | SM00380 | 3.1E-38 | 122 | 185 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 2.0E-14 | 122 | 171 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 24.922 | 122 | 179 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.31E-22 | 122 | 180 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 1.4E-32 | 122 | 179 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 2.3E-12 | 123 | 134 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 2.3E-12 | 145 | 161 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 267 aa Download sequence Send to blast |
MPLHANRIQQ KQEHCIMVSA LKHVISGGIN AGGSGPTSQQ QQLMGAVHSA TSSVPSTRDG 60 TQSATDQVHM LSFSAEGDTC RVCGIEGCLG CNYFPSTTLP DRNKQLNLGS GANAGTRKGK 120 NKYRGVRQRP WGKWAAEIRD PRRAARVWLG TFETAEEAAR AYDKAAIAFR GDKAKLNFSL 180 TSSDQHSNIT NNNITSSSRR TRTSSQLNRS MEEADQDKVK PITVKQSEKV EIFESSASQE 240 ENDQFLWDML QDGDDDDELK AWMSAN* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1gcc_A | 8e-23 | 123 | 180 | 3 | 61 | ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.7G134100.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_007204172.1 | 0.0 | ethylene-responsive transcription factor ERF109 | ||||
TrEMBL | M5VWA3 | 0.0 | M5VWA3_PRUPE; Uncharacterized protein | ||||
STRING | EMJ05371 | 0.0 | (Prunus persica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF2962 | 30 | 72 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G34410.1 | 6e-30 | redox responsive transcription factor 1 |
Link Out ? help Back to Top | |
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Phytozome | Prupe.7G134100.1.p |
Entrez Gene | 18770086 |