PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.7G120800.1.p
Common NamePRUPE_ppa005148mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family Trihelix
Protein Properties Length: 484aa    MW: 54928.9 Da    PI: 6.4064
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.7G120800.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix75.31e-2399199186
            trihelix   1 rWtkqevlaLiearremeerlrrgk..............lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsess 76 
                         +Wt+ +v++Li a+ +++++ +++               +kk++W++vs++m+e+gf +sp+qC++k+++lnkryk+++++ +k+ +++++
  Prupe.7G120800.1.p  99 KWTDTMVRLLIMAVFYIGDEGGSEGtdptgkkksvggllQKKGKWKSVSRAMMEKGFYVSPQQCEDKFNDLNKRYKRVNDILGKGtACRVV 189
                         7**************999999965346677788999999**********************************************559999 PP

            trihelix  77 stcpyfdqle 86 
                         ++  ++++++
  Prupe.7G120800.1.p 190 ENQGLLEKMD 199
                         9999999997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138372.0E-2197224No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
Sequence ? help Back to Top
Protein Sequence    Length: 484 aa     Download sequence    Send to blast
MESNGLFSGI LGLEMPLHQT QNPQNPQNTH HMHQPQMVAY AHHDPDHHQH PHQSVKQGYP  60
FATKSKQIAL SDDDEPGFGA DDNSNGDNKR KISPWQRMKW TDTMVRLLIM AVFYIGDEGG  120
SEGTDPTGKK KSVGGLLQKK GKWKSVSRAM MEKGFYVSPQ QCEDKFNDLN KRYKRVNDIL  180
GKGTACRVVE NQGLLEKMDL SPKMKEEVRK LLNSKHLFFR EMCAYHNSCG HGTVGGVSNG  240
AHNSPPEGAT EPSEIPAHQQ QPQQQRCFHS SENAHVVANS GRSETEASKM VKGGSGGEDE  300
DEDYEDDDSE DEDEEEEEVV EVGPGSRGLM GHGHHEDDDD NDDRASLKRP RKEGCFSGPS  360
SSQLTHQLGC EVRGVLQDVS KSPWEKKQWL KTRLIQLEEQ QVNYQYQAFE LEKQRLKWIK  420
FSGKKERDME RAKLENERRR LENERMLLLV RKKELELLEL HHQQQQQQQN SSNKRSDPSS  480
LTG*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ppe.48850.0fruit
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.7G120800.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007202030.20.0uncharacterized protein LOC18771128
TrEMBLA0A251NAH10.0A0A251NAH1_PRUPE; Uncharacterized protein
STRINGXP_008241327.10.0(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF48203457
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10040.13e-77sequence-specific DNA binding transcription factors