PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.7G075300.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | G2-like | ||||||||
Protein Properties | Length: 434aa MW: 48693.2 Da PI: 7.0487 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 96.8 | 1.5e-30 | 246 | 300 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+rW+++LHe+Fve+v++LGG++kAtPk+il++m ++gLt+ hvkSHLQkYR+ Prupe.7G075300.1.p 246 KTRIRWNQDLHEKFVECVNRLGGADKATPKAILKMMCLDGLTIFHVKSHLQKYRI 300 68****************************************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF46689 | 2.33E-16 | 244 | 300 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 9.6E-27 | 244 | 301 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 4.7E-22 | 246 | 301 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 9.6E-8 | 250 | 299 | IPR001005 | SANT/Myb domain |
Pfam | PF14379 | 2.2E-20 | 343 | 389 | IPR025756 | MYB-CC type transcription factor, LHEQLE-containing domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 434 aa Download sequence Send to blast |
MNAQKIDCQE RIIQQSHGLI SDFNFELGSQ SSQIFDLQQQ AWNMGIWVQQ PTEDQPNMSQ 60 LQSHGLPRSP SSIMSRFESP ASAFYATERC MGFSQYHSQV GNLQFPSGQT YNESYSSMDS 120 SEQADPNLDI RNTLQSIVKS QPSSYHQYQK SSEKPNQIPL PSNNLFEHQQ NKLQGESTAS 180 VRRPSLSLPP KENQDQAGGC NSFSTSPVTQ LSFFPQQGKQ SPRISSGNVS TTYGDSPSTS 240 PVLSSKTRIR WNQDLHEKFV ECVNRLGGAD KATPKAILKM MCLDGLTIFH VKSHLQKYRI 300 AKYLPDTAEG KSEKRTTLNV EPQLDMKTLL QPNNVNFSGS GLQIKEALQL QLDVQRRLHE 360 QLEIQRNLQL RIEEQGKQLK KMFDLQQKTS NDLFKTQNLD ITCHEDAPSD SLNAIQVSSP 420 EDSGNSNFPS KIS* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4k_A | 3e-22 | 246 | 303 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 3e-22 | 246 | 303 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 3e-22 | 246 | 303 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 3e-22 | 246 | 303 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 3e-22 | 246 | 303 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 3e-22 | 246 | 303 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 3e-22 | 246 | 303 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 3e-22 | 246 | 303 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.7G075300.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020423309.1 | 0.0 | myb family transcription factor PHL5 isoform X1 | ||||
Swissprot | Q0WVU3 | 4e-70 | PHL5_ARATH; Myb family transcription factor PHL5 | ||||
TrEMBL | A0A251N848 | 0.0 | A0A251N848_PRUPE; Uncharacterized protein | ||||
STRING | XP_008240945.1 | 0.0 | (Prunus mume) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF3740 | 34 | 65 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06800.1 | 2e-72 | G2-like family protein |
Link Out ? help Back to Top | |
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Phytozome | Prupe.7G075300.1.p |