PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.7G069100.1.p
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family AP2
Protein Properties Length: 554aa    MW: 61656.4 Da    PI: 4.7201
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.7G069100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP222.92.1e-0770117555
                 AP2   5 GVrwdkkrgrWvAeIrdpseng..krkrfslgkfgtaeeAakaaiaarkkleg 55 
                         GV+++   gr++A ++d       k+k    g f t+eeAa+a++ a++kl+g
  Prupe.7G069100.1.p  70 GVSRYT-GGRYEAFLWDN---TepKSKGKT-GGFETEEEAARAHDLAALKLWG 117
                         9*9999.8******9994...245566666.66*****************987 PP
2AP236.21.5e-11148194655
                 AP2   6 VrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                         +r++++ ++W A++     +g   k ++lg+f t+eeAa+a++ a+ +++g
  Prupe.7G069100.1.p 148 IRRNSYHKKWQARLGK---GG-GlKGVYLGTFATEEEAARAYDVAAIRMKG 194
                         6999*********444...33.46************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.75E-1366124No hitNo description
SuperFamilySSF541711.57E-1366126IPR016177DNA-binding domain
SMARTSM003803.7E-1167131IPR001471AP2/ERF domain
PROSITE profilePS5103214.32867125IPR001471AP2/ERF domain
PRINTSPR003677.2E-56879IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.6E-1168125IPR001471AP2/ERF domain
PROSITE profilePS5103214.737135202IPR001471AP2/ERF domain
SMARTSM003802.9E-18144208IPR001471AP2/ERF domain
PfamPF008471.6E-7148194IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.2E-14152203IPR001471AP2/ERF domain
SuperFamilySSF541713.33E-12152204IPR016177DNA-binding domain
CDDcd000181.80E-15156204No hitNo description
PRINTSPR003677.2E-5184204IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 554 aa     Download sequence    Send to blast
MHVESDQDFI GEKNRNDNGI NIFEDPFMSY NCINEEDNGR CGEKPTERQR KRHYKNSKNK  60
IVPRGSAFYG VSRYTGGRYE AFLWDNTEPK SKGKTGGFET EEEAARAHDL AALKLWGDFA  120
TLNFTLNEYK KELGEMQGMS KQDYFLHIRR NSYHKKWQAR LGKGGGLKGV YLGTFATEEE  180
AARAYDVAAI RMKGTKAATN FDLSQYDLNS IFNSAKLPIG KGASKKLRWS SVDDVLENRR  240
SSGANEKIPI LQRDEDYSTG ISRLSSTTQP SSSFEPTIHQ NQPTPNSSNL NQYISPFSHH  300
ALQNTDIQYN QLPQDFSVNP SSQVHDVSGC ENLNFQRSPS LNQWVGTYGG GDNSEGSGFS  360
VGGSQIYGSL DGDPTMRQSV DRNSSGFSFG RDVENHEFDQ LHQYNSDSYS QYLNQNPSFS  420
SLLQDSMQVP NYPQTFYPTF LPGLTNLDPG ATYVGESSRS VSQVPEVSLE AMLAETNQSC  480
GNGIINEVFS LDHEVPVNIM EGNSTVQPGY AENGNFVEDF GVEKSAGLDL DDDFPSSWVE  540
MFLMTLEGSD CHV*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.7G069100.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020424553.11e-156AP2-like ethylene-responsive transcription factor PLT2
TrEMBLA0A251N7U60.0A0A251N7U6_PRUPE; Uncharacterized protein
STRINGXP_008240976.10.0(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1650648
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51190.11e-38AP2 family protein