PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.7G064600.1.p
Common NamePRUPE_ppa009186mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 304aa    MW: 34765 Da    PI: 9.9819
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.7G064600.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B355.11.4e-1716101296
                         EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
                  B3   2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                         fkvl       s+rl++p  f+ + +g    s + tl+d+sg  W+v l  + +++r+++ +GW++Fvk++ L+   ++vF +dg+s+f  
  Prupe.7G064600.1.p  16 FKVL--V-GEFSQRLSIPPAFMYHVNGR--LSPKCTLRDPSGDCWTVGL--EVRGDRFFFHEGWQRFVKDHSLEIANVLVFDYDGKSKF-- 97 
                         5555..2.334568********666555..66699**************..*********************************99988.. PP

                         EEEE CS
                  B3  93 vvkv 96 
                          v++
  Prupe.7G064600.1.p  98 DVTL 101
                         5555 PP
2B357.32.8e-18185279699
                         ..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE.....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
                  B3   6 tpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy...rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                         ++++  ++ r+ +pk+ a + g++   +k +++ed++g sW+vkl+    + ++gr ++tkGW+e + an++  gD++vF+l++ + + ++
  Prupe.7G064600.1.p 185 IRAMRKNRYRMNFPKELAVAKGLIR--KKSVRVEDPHGISWDVKLRLdekEHNGGRLLMTKGWSECCYANNISLGDTLVFELVNAMHGGMK 273
                         5566778899************995..557***************99877777778***************************999999** PP

                         EEEE-S CS
                  B3  94 vkvfrk 99 
                         +++fr 
  Prupe.7G064600.1.p 274 MHIFRG 279
                         ***996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019361.29E-239103IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.101.3E-239104IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086313.36612105IPR003340B3 DNA binding domain
CDDcd100175.54E-1813103No hitNo description
SMARTSM010192.9E-1515105IPR003340B3 DNA binding domain
PfamPF023621.2E-141599IPR003340B3 DNA binding domain
SuperFamilySSF1019361.73E-16178280IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.108.3E-17178279IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086312.393180280IPR003340B3 DNA binding domain
CDDcd100174.55E-15183278No hitNo description
SMARTSM010192.3E-9184280IPR003340B3 DNA binding domain
PfamPF023626.0E-16185279IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    Send to blast
MGRKPTKPSP KIPSFFKVLV GEFSQRLSIP PAFMYHVNGR LSPKCTLRDP SGDCWTVGLE  60
VRGDRFFFHE GWQRFVKDHS LEIANVLVFD YDGKSKFDVT LYDPIGSEKE LEPAKKRRGN  120
RARVKEEIIE LDTEEPDKDS EEDARMSNIR KRKSFKSGKR IARTDGGNET SNAPIVFRSK  180
HLCFIRAMRK NRYRMNFPKE LAVAKGLIRK KSVRVEDPHG ISWDVKLRLD EKEHNGGRLL  240
MTKGWSECCY ANNISLGDTL VFELVNAMHG GMKMHIFRGN SYVVLDASCV KYQGYVVENL  300
ALQ*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1114124KKRRGNRARVK
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ppe.193950.0fruit
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.7G064600.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankFM2535631e-168FM253563.1 Prunus cerasifera BAC insert containing Ma gene, resistant Ma1 allele, clone 76H19.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007202358.10.0putative B3 domain-containing protein At5g66980
TrEMBLM5VQI50.0M5VQI5_PRUPE; Uncharacterized protein
STRINGEMJ035570.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF71851546
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66980.12e-21B3 family protein