PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.7G058300.1.p
Common NamePRUPE_ppa006202mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family AP2
Protein Properties Length: 426aa    MW: 47197.8 Da    PI: 9.3323
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.7G058300.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.13.8e-1768127155
                 AP2   1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                         s y+GV++++++gr++A+++d  ++n+   k+ k+++lg ++ +e Aa+a++ a++k++g
  Prupe.7G058300.1.p  68 SIYRGVTRHRWTGRYEAHLWDkSTWNQnqnKKgKQVYLGAYDDEEAAARAYDLAALKYWG 127
                         57*******************766644468557*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541714.51E-1768136IPR016177DNA-binding domain
PfamPF008476.4E-1368127IPR001471AP2/ERF domain
PROSITE profilePS5103220.12669135IPR001471AP2/ERF domain
SMARTSM003801.9E-2569141IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.8E-1569136IPR001471AP2/ERF domain
PRINTSPR003674.2E-57081IPR001471AP2/ERF domain
PRINTSPR003674.2E-5117137IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 426 aa     Download sequence    Send to blast
MASSSSDPGP KTESGGGGGA GAEASEAVTA SDQLLLYRGL KKAKKERGCT AKERISKMPP  60
CAAGKRSSIY RGVTRHRWTG RYEAHLWDKS TWNQNQNKKG KQVYLGAYDD EEAAARAYDL  120
AALKYWGPGT LINFPVTDYT RDLEEMQNMS REEYLASLRR KSSGFSRGIS KYRGLSSRWE  180
PSLGRMGGSE YFNSIHYGTG DDPATESEFL GAFCIERKFD LTSYIKWWGT NKSRQADTST  240
KSSEETKHGF VGDIGVELKT LEWEIQPTEP YQIPRLGISR VSKKHKGARV SAMSILSRSA  300
AYKNLQENAS KKQENNADND ENENKNTIHK MDYGKAVEKS TSHDERLSAA LGMSSGLSLQ  360
VQRNAFPLTP FLSAPLMTNY NTIDPLVDPI LWTSLAPVLP SGISRTAEIT KTETSSTFTL  420
FRPEE*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ppe.45510.0fruit
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.7G058300.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020424947.10.0AP2-like ethylene-responsive transcription factor At2g41710
SwissprotQ8GWK21e-178AP2L4_ARATH; AP2-like ethylene-responsive transcription factor At2g41710
TrEMBLA0A251N7C20.0A0A251N7C2_PRUPE; Uncharacterized protein
STRINGXP_008245673.10.0(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF60072936
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41710.11e-164AP2 family protein