PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Prupe.7G037900.3.p | ||||||||
Common Name | PRUPE_ppa005279mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 453aa MW: 49949.8 Da PI: 8.4385 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 31.7 | 3.4e-10 | 167 | 207 | 5 | 45 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 k rr+++NReAAr+sR+RKka++++Le +L++ ++L Prupe.7G037900.3.p 167 KTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQEL 207 788*************************9777777666555 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 8.2E-10 | 163 | 226 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.415 | 165 | 209 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 7.5E-7 | 167 | 207 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14708 | 3.50E-21 | 167 | 219 | No hit | No description |
SuperFamily | SSF57959 | 7.74E-7 | 167 | 210 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 1.5E-7 | 168 | 211 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 170 | 185 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 2.5E-32 | 249 | 324 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 453 aa Download sequence Send to blast |
MGSRTVKTGA NDGNKVVTEM PSFVPPVPTS NPTGTEGSTI RSSRISDFGT LEQTLGFRIE 60 DAVDIGRSPV FNQNKLSSQA LGSSDAQFGS LNKLLPLQKE AQQNLPSVSR SNHENWGESS 120 MADGSPRTDT STDDTEDKNQ RTELNQMTGL LVSDSSDRSK EKPGDQKTLR RLAQNREAAR 180 KSRLRKKAYV QQLESSRLKL TQLEQELQRA RQQGIFISSS GDQSHSMSGN GALAFDVEYA 240 RWLEEHNRQI NELRAAVNSH AGDTELRTVI DNVIAHYDDI FRLKGTAAKA DVFHILSGMW 300 KTPAERCFMW IGGFRSSELL KLLVNQLEPL TEQQLVGIYN LQQSSQQAED ALSQGMEALQ 360 QSLAETLASG SPGPSGSSGN VANYMGQMAM AMGKLGTLEG FLRQADNLRQ QTLQQMHRIL 420 TTRQSARALL AISDYFSRLR ALSSLWLARP RE* |
Expression -- UniGene ? help Back to Top | ||||||
---|---|---|---|---|---|---|
UniGene ID | E-value | Expressed in | ||||
Ppe.14464 | 0.0 | fruit |
Functional Description ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Description | |||||
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. |
Cis-element ? help Back to Top | |
---|---|
Source | Link |
PlantRegMap | Prupe.7G037900.3.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_020423805.1 | 0.0 | transcription factor HBP-1b(c38) | ||||
Refseq | XP_020423806.1 | 0.0 | transcription factor HBP-1b(c38) | ||||
Refseq | XP_020423807.1 | 0.0 | transcription factor HBP-1b(c38) | ||||
Refseq | XP_020423808.1 | 0.0 | transcription factor HBP-1b(c38) | ||||
Swissprot | O24160 | 0.0 | TGA21_TOBAC; TGACG-sequence-specific DNA-binding protein TGA-2.1 | ||||
TrEMBL | A0A251N6D9 | 0.0 | A0A251N6D9_PRUPE; Uncharacterized protein | ||||
STRING | EMJ05074 | 0.0 | (Prunus persica) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G12250.2 | 1e-148 | TGACG motif-binding factor 6 |
Link Out ? help Back to Top | |
---|---|
Phytozome | Prupe.7G037900.3.p |
Entrez Gene | 18770618 |