PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.6G364100.1.p
Common NamePRUPE_ppa022980mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family AP2
Protein Properties Length: 861aa    MW: 94111.1 Da    PI: 6.7608
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.6G364100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP246.21.1e-14349408155
                 AP2   1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                         s y+GV++++++gr++A+++d  +   g  ++ ++++lg ++ +e+Aa+a++ a++k++g
  Prupe.6G364100.1.p 349 SIYRGVTRHRWTGRYEAHLWDnSCRrEGqtRKgRQVYLGGYDKEEKAARAYDLAALKYWG 408
                         57*******************666664478446*************************98 PP
2AP246.31e-14451502155
                 AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                         s y+GV+++++ grW A+I  +     +k  +lg+f t eeAa+a++ a+ k++g
  Prupe.6G364100.1.p 451 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 502
                         57****************988532...5************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.7E-11349408IPR001471AP2/ERF domain
SuperFamilySSF541714.45E-17349418IPR016177DNA-binding domain
CDDcd000182.90E-22349418No hitNo description
SMARTSM003802.0E-29350422IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.5E-15350417IPR001471AP2/ERF domain
PROSITE profilePS5103219.164350416IPR001471AP2/ERF domain
PRINTSPR003676.7E-6351362IPR001471AP2/ERF domain
SuperFamilySSF541712.09E-17451511IPR016177DNA-binding domain
PfamPF008471.3E-9451502IPR001471AP2/ERF domain
CDDcd000181.82E-24451510No hitNo description
SMARTSM003802.4E-33452516IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.108.8E-18452510IPR001471AP2/ERF domain
PROSITE profilePS5103219.045452510IPR001471AP2/ERF domain
PRINTSPR003676.7E-6492512IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 861 aa     Download sequence    Send to blast
MGSMNWLGFS LSPQEVVPPD PSISEGDHHH HHHNDGHELS DDQTATLVSR LGFKYSDDIS  60
GTDVSGGCFD LTSHDDSSAT TTAAAAVPNN HSHNHLIPPP FGMLHQAAAF NTTNIHSQGA  120
DWSNMNSSDS STYKTTSDHL SMLMGSNNSY RSQNLENHHQ QPKLENFLGR HSFVADEHHI  180
GGQSSSSGTH AYNNNSTSST STSSSNIGLS MIKTWLRNQP APVILPHHHD HHDHHDHHQR  240
INKKDINTTD TTTTTSSSSS AVQTLSLSMS TGSHTHHNTT STAAATGETC STDRDNTCND  300
NNKLAVVRTT TSTAPPPGID SQTTSTTAIA TAIEAVPRKS VDTFGQRTSI YRGVTRHRWT  360
GRYEAHLWDN SCRREGQTRK GRQVYLGGYD KEEKAARAYD LAALKYWGTT TTTNFPISNY  420
EKEIDEMKHM TRQEYVASLR RKSSGFSRGA SIYRGVTRHH QHGRWQARIG RVAGNKDLYL  480
GTFSTQEEAA EAYDIAAIKF RGLNAVTNFD MTRYDVKSIL DSSTLPIGGA AKRLKDVEQA  540
AQHQHHEMSL LVDGHNRSAP TDDHHDKMMM MMMNGSTGTC HDQYHHHQQQ QLLIMGSGTA  600
AADNYGSGTA GGWPTLAFNQ AAAAAHQTPF GMHYYSSLVP YNNNSGQRVW CKQEQEQEQD  660
IHSNTAPQSF YHHHQQQQQD QDQDLHHHQL LQLGSSHNFF QAAGMDSMEH SSGSNSVMYS  720
TATATNGGGG DHGGYIIPMG TVISNDHNNG FGDGTNHDHQ VKAVALGFEN VFGSTTTSAN  780
ATNVTGDAYN NHARNLYYLP QQPPQSSSVS SVSSAGVAKG GSAYDIHEAG QCNNWMPTAV  840
PTSTNSNINM PPTFTVWNDT *
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.6G364100.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKC4296730.0KC429673.1 Rosa canina BBM1 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020421844.10.0AP2-like ethylene-responsive transcription factor BBM
TrEMBLA0A251P0W50.0A0A251P0W5_PRUPE; Uncharacterized protein
STRINGEMJ090470.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF81862840
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G17430.11e-124AP2 family protein