PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.6G355700.1.p
Common NameMYB9, PRUPE_ppa010069mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family MYB
Protein Properties Length: 266aa    MW: 30215.8 Da    PI: 5.6238
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.6G355700.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.52.8e-17550348
                        SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
     Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                        +WT eEd+ll ++v+q+G g W++++   g++R++k+c++rw++yl
  Prupe.6G355700.1.p  5 PWTREEDQLLRKCVEQYGEGKWHRVPLLAGLNRCRKSCRLRWLNYL 50
                        7*******************************************97 PP
2Myb_DNA-binding48.91.5e-1556100147
                         TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
     Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                         rg++ +eE +l+++++k+lG++ W+++a++++ gRt++++k++w+ +
  Prupe.6G355700.1.p  56 RGSFEEEEVDLIIKLHKLLGNR-WSLVAARLP-GRTGNDVKNYWNCH 100
                         899*******************.*********.***********977 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129418.16150IPR017930Myb domain
SMARTSM007171.1E-13252IPR001005SANT/Myb domain
SuperFamilySSF466899.54E-28497IPR009057Homeodomain-like
PfamPF002491.9E-15550IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.604.2E-22557IPR009057Homeodomain-like
CDDcd001671.39E-11550No hitNo description
PROSITE profilePS5129425.55351105IPR017930Myb domain
SMARTSM007173.3E-1555103IPR001005SANT/Myb domain
PfamPF002493.7E-145698IPR001005SANT/Myb domain
CDDcd001672.78E-1058101No hitNo description
Gene3DG3DSA:1.10.10.602.8E-2458106IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    Send to blast
MGGIPWTREE DQLLRKCVEQ YGEGKWHRVP LLAGLNRCRK SCRLRWLNYL RPNIKRGSFE  60
EEEVDLIIKL HKLLGNRWSL VAARLPGRTG NDVKNYWNCH LSKKLNAQEA EDKNKHCARN  120
VQVMRPPASN YASTNSKRPY STALDQAPSN NFCQPVNLLA REGGSSSSTQ IPTPMPMPMP  180
CYIGDGQNQM FQAEHDESNK NVPSVEEEDI NDGINMGDFP MEGLPFKGVR EHDQDDDADD  240
DGVPNHNKWE WDDSILGDVD LWTHC*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1a5j_A4e-2451079110B-MYB
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.6G355700.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT1592320.0KT159232.1 Prunus persica R2R3-MYB transcription factor (MYB9) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007205727.10.0transcription factor MYB90
TrEMBLM5W0N90.0M5W0N9_PRUPE; R2R3-MYB transcription factor
STRINGEMJ069260.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3134817
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66370.19e-56myb domain protein 113