PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Prupe.6G343100.1.p | ||||||||
Common Name | PRUPE_ppa005585mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 454aa MW: 49100.7 Da PI: 6.4216 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 43.7 | 5.8e-14 | 248 | 297 | 3 | 52 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52 ++kr rr+ +NRe+ArrsR+RK+a + eLe + +L eN++L k+l Prupe.6G343100.1.p 248 DVKRVRRMLSNRESARRSRRRKQAHLSELEAQASQLRVENSSLLKRLTDA 297 689*****************************************998765 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 3.6E-18 | 246 | 310 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.174 | 248 | 303 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 7.8E-12 | 249 | 296 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 2.5E-11 | 250 | 301 | No hit | No description |
SuperFamily | SSF57959 | 1.37E-10 | 250 | 297 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 253 | 268 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF12498 | 8.5E-42 | 317 | 442 | IPR020983 | Basic leucine-zipper, C-terminal |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0071215 | Biological Process | cellular response to abscisic acid stimulus | ||||
GO:0071333 | Biological Process | cellular response to glucose stimulus | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0042802 | Molecular Function | identical protein binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 454 aa Download sequence Send to blast |
MDRMFSVEEM SDQLWSSSAP PVNEADDDLS KMNRSASEWA FQRFLQETSP YSPSPSPPQP 60 PPPPSSSSSS THHDHNDVAE IKMINAHHPN PTHAPNNNNN NNNNSNDYNS NNTPSFSLQP 120 PNVPVDSEEY QAFLKTKLNL ACAAVALSRV KGSLVDSQDS AVLAGSGSQA SNTSHLGSQA 180 PSKGAGYDLS RPHDKNANAP VGIPSLPATQ HRSVVPVRQA TSGSSRELSD DEDIEGETAI 240 TENVDPADVK RVRRMLSNRE SARRSRRRKQ AHLSELEAQA SQLRVENSSL LKRLTDADRK 300 YNEAAVDNRV LKADIETLRA KVKMAEETVK RITGLNMFHA VSEISSIGMP PFDGSPSETS 360 TDAAVPVQDD PNHHFCQPAS NSPTPTHDLR VKHDSADIPS VENVQQNSAA TSADAVGNKM 420 GRTPSLHRVA SLEHLQKRIR GGNPSGPHSN GEQ* |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 262 | 269 | RRSRRRKQ |
2 | 264 | 269 | SRRRKQ |
Functional Description ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Description | |||||
UniProt | Binds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control. |
Binding Motif ? help Back to Top | |||
---|---|---|---|
Motif ID | Method | Source | Motif file |
MP00040 | PBM | Transfer from AT5G28770 | Download |
Cis-element ? help Back to Top | |
---|---|
Source | Link |
PlantRegMap | Prupe.6G343100.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_007205177.1 | 0.0 | light-inducible protein CPRF2 | ||||
Swissprot | Q99090 | 1e-129 | CPRF2_PETCR; Light-inducible protein CPRF2 | ||||
TrEMBL | M5VZ41 | 0.0 | M5VZ41_PRUPE; Uncharacterized protein | ||||
STRING | EMJ06376 | 0.0 | (Prunus persica) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF4176 | 33 | 58 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G28770.2 | 2e-65 | bZIP family protein |
Link Out ? help Back to Top | |
---|---|
Phytozome | Prupe.6G343100.1.p |
Entrez Gene | 18773097 |
Publications ? help Back to Top | |||
---|---|---|---|
|