PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.6G338800.1.p
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family GeBP
Protein Properties Length: 433aa    MW: 47103.8 Da    PI: 4.4804
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.6G338800.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573115.92.4e-36134233297
              DUF573   2 lfqrlwseeDeivlLqGlidfkaktgk....spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqki 88 
                         lfqrlw++eDei lLqG++d+++ +g     + ++d+  fy+++k++++++++k+qlveK+rrLKkK+++  +k++sgke+sf+++hdq +
  Prupe.6G338800.1.p 134 LFQRLWTDEDEIELLQGFLDYTTMRGNkgshHGQNDTALFYDQIKSKLQLDFNKNQLVEKLRRLKKKYRNVLNKIASGKEVSFKSPHDQAT 224
                         79********************9999865433345******************************************************** PP

              DUF573  89 felskkiWg 97 
                         fe+s+kiW 
  Prupe.6G338800.1.p 225 FEISRKIWS 233
                         ********6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045047.0E-34135233IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 433 aa     Download sequence    Send to blast
MAPDQDDAVL PEGDLSSSSQ DDEEEDDVVD DDEEEDDVDD DDDVLNDDVI NSASPSTSSA  60
GATDSLPVAI ATPTVTVALP ARDPPPLALA TTTSTATTVI ANDAVLSSDP KRHAVLSPQP  120
EEKKPAALDD SRRLFQRLWT DEDEIELLQG FLDYTTMRGN KGSHHGQNDT ALFYDQIKSK  180
LQLDFNKNQL VEKLRRLKKK YRNVLNKIAS GKEVSFKSPH DQATFEISRK IWSNIGRIGP  240
DDNALDDEDP SPNPNNPNFN NYEIKNEEAA GFAGDKKSTP RSRKRSRTQL RAEERAPPSR  300
GGFVEPSPVI KDNNNSINNS NHGGGGGNSC SNCNVHGLIE ETVKSCLSPL FKELLSSAMG  360
GGSARGFGGL SLNPIPLSFG GPSMNLNFGG CEGADEKWRK QQILELEVYS KRLELVQNQI  420
KVALEELRSS RG*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ppe.13952e-64fruit
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.6G338800.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020421984.10.0probable transcription factor At3g04930
TrEMBLA0A251NZP40.0A0A251NZP4_PRUPE; Uncharacterized protein
STRINGXP_008218226.10.0(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF32553365
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28040.12e-72DNA-binding storekeeper protein-related transcriptional regulator