PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.6G323800.5.p
Common NamePRUPE_ppa000472mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 1166aa    MW: 130107 Da    PI: 9.8417
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.6G323800.5.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.23.8e-084480341
                        SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHH CS
     Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqck 41
                         W++ E e+++da +++G++ W+++a+ +  +R+ +++ 
  Prupe.6G323800.5.p 44 EWSKGELERFYDAYRKYGKD-WRKVAAAVR-NRSIEMVE 80
                        7*****************99.*********.***98875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466893.89E-94188IPR009057Homeodomain-like
SMARTSM007175.9E-44189IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.604.6E-44479IPR009057Homeodomain-like
PfamPF002497.0E-74484IPR001005SANT/Myb domain
CDDcd001671.63E-44479No hitNo description
PfamPF065844.4E-33645745IPR033471DIRP domain
SMARTSM011351.8E-59645746IPR033471DIRP domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 1166 aa     Download sequence    Send to blast
MAPTKKSKSV KRYATVNEAS PEKYGGGSNK KKQRRKLSDK LGPEWSKGEL ERFYDAYRKY  60
GKDWRKVAAA VRNRSIEMVE ALYNMNRAYL SLPEGTASVV GLKAMMTDHY NVMEGSDSER  120
ESNDASGFSR KPQKRKLGKD QLSASKDVFQ SHSSASHEGC LSLLKRRRLD GGQPRAVGKR  180
TPRFPVSYAY KKDDRDTYVS PIKKGRRSEG DNDDEVAHVA ALLTEASQRG GSPQISQTPY  240
RRPVHVKSSS VQSSERMHPP RGKARANLRD PSMDEDWLEG SIGSKGAETG DYARDSLEGV  300
GTVEINWKGK KFYGKKEKAK DIGNHQFDDG GEACSGTEEG LNVSSRGKDD IEVSNTKGER  360
FSPQGQRKRS KKLYFGDESS CLDALQTLAD LSLMMPESTM ESGSSVQLKE EGTNLDVEDK  420
FSVPEATSTS QSRNKNKIPS AKHRLPFAIS GVEGTNSKKS KLGREPAFDT TAVSESEQQL  480
QSTTKTWKRK RKSSVLKISN ADAPIDSNIN EPLKIEAFGE EENKPVTKGK RTNQSSTPSK  540
QWKSTRSLEG SLNSDYRRTG TDLTATTAQA PTSNHVNLPT KRISRRKMYI PRTLHPKEKS  600
SEKKLKNQLN IRSSSAQDRA LYLKEKTSCC LSSHLVRRWC TFEWFYSALD YPWFAKREFE  660
EYLNHVGLGH IPRLTRVEWG VIRSSLGKPR RFSEHFLHEE REKLKQYRES VRKHYAELRT  720
GDREGLPTDL ARPLSVGQRV IALHPKTREV HDGSVLTVDH DKCRVQFDRP DIGVEFVMDV  780
DCMPLNPLDN MPEALRRQNF AFDKFSLTSK EANKNGNLNF GGPHLEKATS PMNTSVKQGK  840
EDSNHTTSQP KAASADIDRA QQSTYSQPGM VVAHNQARDA DIRALSELTR ALDKKEALLM  900
ELRNTNNNIL ENQNSGECSL KDSEPFKKHY ATVLVQLKEA SGQVSSALLN LRQRNTYPAN  960
SLPPWLKQPA NSTIYGGLPS SFDSSISQES GSSVAEIVEV SRSKAHMMVN AAIQAMSSRK  1020
GGEDAYVRIR EALDSIDNQH LPSDSRLSLN RSQEQVNGNL GHRNQLISST SDPNFTSDSP  1080
GPKPNTDTEK TEAQVLSDII SACVMAVHMI QTCTERQYPP AVVAQVLDYA VTSLHPRCPQ  1140
NVGIYREIQM CMGRIKTQIL ALVPT*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1129136RKPQKRKL
2164168KRRRL
3584605RRKMYIPRTLHPKEKSSEKKLK
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.6G323800.5.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020423003.10.0protein ALWAYS EARLY 2 isoform X2
TrEMBLA0A251NYX20.0A0A251NYX2_PRUPE; Uncharacterized protein
STRINGXP_008246389.10.0(Prunus mume)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21430.20.0DNA binding