PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.6G323800.4.p
Common NamePRUPE_ppa000472mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 1119aa    MW: 124847 Da    PI: 9.9596
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.6G323800.4.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.33.6e-084581341
                        SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHH CS
     Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqck 41
                         W++ E e+++da +++G++ W+++a+ +  +R+ +++ 
  Prupe.6G323800.4.p 45 EWSKGELERFYDAYRKYGKD-WRKVAAAVR-NRSIEMVE 81
                        7*****************99.*********.***98875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466893.21E-94189IPR009057Homeodomain-like
SMARTSM007175.9E-44290IPR001005SANT/Myb domain
CDDcd001671.52E-44580No hitNo description
PfamPF002496.6E-74585IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.604.4E-44580IPR009057Homeodomain-like
PfamPF065844.2E-33646746IPR033471DIRP domain
SMARTSM011351.8E-59646747IPR033471DIRP domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 1119 aa     Download sequence    Send to blast
MAPTKKSKSV KRYATVNEAS PEKYGGGSNK KKQRKRKLSD KLGPEWSKGE LERFYDAYRK  60
YGKDWRKVAA AVRNRSIEMV EALYNMNRAY LSLPEGTASV VGLKAMMTDH YNVMEGSDSE  120
RESNDASGFS RKPQKRKLGK DQLSASKDVF QSHSSASHEG CLSLLKRRRL DGGQPRAVGK  180
RTPRFPVSYA YKKDDRDTYV SPIKKGRRSE GDNDDEVAHV AALLTEASQR GGSPQISQTP  240
YRRPVHVKSS SVQSSERMHP PRGKARANLR DPSMDEDWLE GSIGSKGAET GDYARDSLEG  300
VGTVEINWKG KKFYGKKEKA KDIGNHQFDD GGEACSGTEE GLNVSSRGKD DIEVSNTKGE  360
RFSPQGQRKR SKKLYFGDES SCLDALQTLA DLSLMMPEST MESGSSVQLK EEGTNLDVED  420
KFSVPEATST SQSRNKNKIP SAKHRLPFAI SGVEGTNSKK SKLGREPAFD TTAVSESEQQ  480
LQSTTKTWKR KRKSSVLKIS NADAPIDSNI NEPLKIEAFG EEENKPVTKG KRTNQSSTPS  540
KQWKSTRSLE GSLNSDYRRT GTDLTATTAQ APTSNHVNLP TKRISRRKMY IPRTLHPKEK  600
SSEKKLKNQL NIRSSSAQDR ALYLKEKTSC CLSSHLVRRW CTFEWFYSAL DYPWFAKREF  660
EEYLNHVGLG HIPRLTRVEW GVIRSSLGKP RRFSEHFLHE EREKLKQYRE SVRKHYAELR  720
TGDREGLPTD LARPLSVGQR VIALHPKTRE VHDGSVLTVD HDKCRVQFDR PDIGVEFVMD  780
VDCMPLNPLD NMPEALRRQN FAFDKFSLTS KEANKNGNLN FGGPHLEKAT SPMNTSVKQG  840
KEDSNHTTSQ PKAASADIDR AQQSTYSQPG MVVAHNQARD ADIRALSELT RALDKKVSSA  900
LLNLRQRNTY PANSLPPWLK QPANSTIYGG LPSSFDSSIS QESGSSVAEI VEVSRSKAHM  960
MVNAAIQAMS SRKGGEDAYV RIREALDSID NQHLPSDSRL SLNRSQEQVN GNLGHRNQLI  1020
SSTSDPNFTS DSPGPKPNTD TEKTEAQVLS DIISACVMAV HMIQTCTERQ YPPAVVAQVL  1080
DYAVTSLHPR CPQNVGIYRE IQMCMGRIKT QILALVPT*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1130137RKPQKRKL
2165169KRRRL
3585606RRKMYIPRTLHPKEKSSEKKLK
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.6G323800.4.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020423006.10.0protein ALWAYS EARLY 2 isoform X5
TrEMBLA0A251NYS50.0A0A251NYS5_PRUPE; Uncharacterized protein
STRINGXP_008246389.10.0(Prunus mume)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21430.20.0DNA binding