PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Prupe.6G323800.1.p

Common Name

PRUPE_ppa000472mg

Organism

Prunus persica

Taxonomic ID

3760

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 1167aa MW: 130235 Da PI: 9.8651

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Prupe.6G323800.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25.2	3.8e-08	45	81	3	41
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqck 41 W++ E e+++da +++G++ W+++a+ + +R+ +++ Prupe.6G323800.1.p 45 EWSKGELERFYDAYRKYGKD-WRKVAAAVR-NRSIEMVE 81 7***************99.*****.*98875 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF46689	3.36E-9	41	89	IPR009057	Homeodomain-like
SMART	SM00717	5.9E-4	42	90	IPR001005	SANT/Myb domain
CDD	cd00167	1.66E-4	45	80	No hit	No description
Pfam	PF00249	7.0E-7	45	85	IPR001005	SANT/Myb domain
Gene3D	G3DSA:1.10.10.60	4.6E-4	45	80	IPR009057	Homeodomain-like
SMART	SM01135	1.8E-59	646	747	IPR033471	DIRP domain
Pfam	PF06584	4.4E-33	646	746	IPR033471	DIRP domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 1167 aa Download sequence Send to blast
MAPTKKSKSV KRYATVNEAS PEKYGGGSNK KKQRKRKLSD KLGPEWSKGE LERFYDAYRK 60 YGKDWRKVAA AVRNRSIEMV EALYNMNRAY LSLPEGTASV VGLKAMMTDH YNVMEGSDSE 120 RESNDASGFS RKPQKRKLGK DQLSASKDVF QSHSSASHEG CLSLLKRRRL DGGQPRAVGK 180 RTPRFPVSYA YKKDDRDTYV SPIKKGRRSE GDNDDEVAHV AALLTEASQR GGSPQISQTP 240 YRRPVHVKSS SVQSSERMHP PRGKARANLR DPSMDEDWLE GSIGSKGAET GDYARDSLEG 300 VGTVEINWKG KKFYGKKEKA KDIGNHQFDD GGEACSGTEE GLNVSSRGKD DIEVSNTKGE 360 RFSPQGQRKR SKKLYFGDES SCLDALQTLA DLSLMMPEST MESGSSVQLK EEGTNLDVED 420 KFSVPEATST SQSRNKNKIP SAKHRLPFAI SGVEGTNSKK SKLGREPAFD TTAVSESEQQ 480 LQSTTKTWKR KRKSSVLKIS NADAPIDSNI NEPLKIEAFG EEENKPVTKG KRTNQSSTPS 540 KQWKSTRSLE GSLNSDYRRT GTDLTATTAQ APTSNHVNLP TKRISRRKMY IPRTLHPKEK 600 SSEKKLKNQL NIRSSSAQDR ALYLKEKTSC CLSSHLVRRW CTFEWFYSAL DYPWFAKREF 660 EEYLNHVGLG HIPRLTRVEW GVIRSSLGKP RRFSEHFLHE EREKLKQYRE SVRKHYAELR 720 TGDREGLPTD LARPLSVGQR VIALHPKTRE VHDGSVLTVD HDKCRVQFDR PDIGVEFVMD 780 VDCMPLNPLD NMPEALRRQN FAFDKFSLTS KEANKNGNLN FGGPHLEKAT SPMNTSVKQG 840 KEDSNHTTSQ PKAASADIDR AQQSTYSQPG MVVAHNQARD ADIRALSELT RALDKKEALL 900 MELRNTNNNI LENQNSGECS LKDSEPFKKH YATVLVQLKE ASGQVSSALL NLRQRNTYPA 960 NSLPPWLKQP ANSTIYGGLP SSFDSSISQE SGSSVAEIVE VSRSKAHMMV NAAIQAMSSR 1020 KGGEDAYVRI REALDSIDNQ HLPSDSRLSL NRSQEQVNGN LGHRNQLISS TSDPNFTSDS 1080 PGPKPNTDTE KTEAQVLSDI ISACVMAVHM IQTCTERQYP PAVVAQVLDY AVTSLHPRCP 1140 QNVGIYREIQ MCMGRIKTQI LALVPT*

Sequence ? help Back to Top

Protein Sequence Length: 1167 aa Download sequence Send to blast

MAPTKKSKSV KRYATVNEAS PEKYGGGSNK KKQRKRKLSD KLGPEWSKGE LERFYDAYRK  60
YGKDWRKVAA AVRNRSIEMV EALYNMNRAY LSLPEGTASV VGLKAMMTDH YNVMEGSDSE  120
RESNDASGFS RKPQKRKLGK DQLSASKDVF QSHSSASHEG CLSLLKRRRL DGGQPRAVGK  180
RTPRFPVSYA YKKDDRDTYV SPIKKGRRSE GDNDDEVAHV AALLTEASQR GGSPQISQTP  240
YRRPVHVKSS SVQSSERMHP PRGKARANLR DPSMDEDWLE GSIGSKGAET GDYARDSLEG  300
VGTVEINWKG KKFYGKKEKA KDIGNHQFDD GGEACSGTEE GLNVSSRGKD DIEVSNTKGE  360
RFSPQGQRKR SKKLYFGDES SCLDALQTLA DLSLMMPEST MESGSSVQLK EEGTNLDVED  420
KFSVPEATST SQSRNKNKIP SAKHRLPFAI SGVEGTNSKK SKLGREPAFD TTAVSESEQQ  480
LQSTTKTWKR KRKSSVLKIS NADAPIDSNI NEPLKIEAFG EEENKPVTKG KRTNQSSTPS  540
KQWKSTRSLE GSLNSDYRRT GTDLTATTAQ APTSNHVNLP TKRISRRKMY IPRTLHPKEK  600
SSEKKLKNQL NIRSSSAQDR ALYLKEKTSC CLSSHLVRRW CTFEWFYSAL DYPWFAKREF  660
EEYLNHVGLG HIPRLTRVEW GVIRSSLGKP RRFSEHFLHE EREKLKQYRE SVRKHYAELR  720
TGDREGLPTD LARPLSVGQR VIALHPKTRE VHDGSVLTVD HDKCRVQFDR PDIGVEFVMD  780
VDCMPLNPLD NMPEALRRQN FAFDKFSLTS KEANKNGNLN FGGPHLEKAT SPMNTSVKQG  840
KEDSNHTTSQ PKAASADIDR AQQSTYSQPG MVVAHNQARD ADIRALSELT RALDKKEALL  900
MELRNTNNNI LENQNSGECS LKDSEPFKKH YATVLVQLKE ASGQVSSALL NLRQRNTYPA  960
NSLPPWLKQP ANSTIYGGLP SSFDSSISQE SGSSVAEIVE VSRSKAHMMV NAAIQAMSSR  1020
KGGEDAYVRI REALDSIDNQ HLPSDSRLSL NRSQEQVNGN LGHRNQLISS TSDPNFTSDS  1080
PGPKPNTDTE KTEAQVLSDI ISACVMAVHM IQTCTERQYP PAVVAQVLDY AVTSLHPRCP  1140
QNVGIYREIQ MCMGRIKTQI LALVPT*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	130	137	RKPQKRKL
2	165	169	KRRRL
3	585	606	RRKMYIPRTLHPKEKSSEKKLK

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Prupe.6G323800.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020422998.1	0.0	protein ALWAYS EARLY 2 isoform X1
Refseq	XP_020422999.1	0.0	protein ALWAYS EARLY 2 isoform X1
Refseq	XP_020423000.1	0.0	protein ALWAYS EARLY 2 isoform X1
Refseq	XP_020423001.1	0.0	protein ALWAYS EARLY 2 isoform X1
TrEMBL	A0A251P294	0.0	A0A251P294_PRUPE; Uncharacterized protein
STRING	XP_008246389.1	0.0	(Prunus mume)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF1783	33	69

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	0.0	DNA binding

Link Out ? help Back to Top
Phytozome	Prupe.6G323800.1.p
Entrez Gene	18772125