PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.6G282300.2.p | ||||||||
Common Name | PRUPE_ppa021179mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | G2-like | ||||||||
Protein Properties | Length: 340aa MW: 38236.2 Da PI: 7.3926 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 101.5 | 5.3e-32 | 67 | 120 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH rF++ave+LGG+e+AtPk +l+lm++kgL+++hvkSHLQ+YR+ Prupe.6G282300.2.p 67 PRLRWTPDLHLRFIHAVERLGGQERATPKLVLQLMNIKGLSIAHVKSHLQMYRS 120 8****************************************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 8.9E-30 | 63 | 121 | IPR009057 | Homeodomain-like |
PROSITE profile | PS51294 | 12.685 | 63 | 123 | IPR017930 | Myb domain |
SuperFamily | SSF46689 | 1.47E-14 | 65 | 121 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 9.3E-23 | 67 | 122 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 9.8E-10 | 68 | 119 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 340 aa Download sequence Send to blast |
MEGDSDSSKT SPSGEQTEGG SESGENYDDI EESGKPKNNG GSSSNSTVEE SDQRKASVRP 60 YVRSKMPRLR WTPDLHLRFI HAVERLGGQE RATPKLVLQL MNIKGLSIAH VKSHLQMYRS 120 KKIDDAGQVL ADHQGHLVEC GDKNIYNLSQ LPMLQGYNRS HSTSFRYGDA KSWTAYENPR 180 YPRSSGFQGN WSSSSAYNYL TSCSFGEQSS WIARTLKQEC QLYNIRESLQ AQHQHQARLS 240 QQLIDLNPTN THVQVQPKPK ELITSFNNSN NLELTSKKNE DHQSKSLKRT ASDCEDLDLD 300 LSLRLTSRNK NEDDIHEVDS SLSLSLYSPP TSKLSRLKE* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4k_A | 2e-17 | 68 | 122 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 2e-17 | 68 | 122 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_A | 2e-17 | 68 | 122 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 2e-17 | 68 | 122 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 2e-17 | 68 | 122 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 2e-17 | 68 | 122 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 2e-17 | 68 | 122 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 2e-17 | 68 | 122 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 2e-17 | 68 | 122 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 2e-17 | 68 | 122 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 2e-17 | 68 | 122 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 2e-17 | 68 | 122 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00297 | DAP | Transfer from AT2G38300 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.6G282300.2.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020422160.1 | 0.0 | transcription repressor KAN1 | ||||
TrEMBL | A0A251NWW3 | 0.0 | A0A251NWW3_PRUPE; Uncharacterized protein | ||||
STRING | XP_008243158.1 | 0.0 | (Prunus mume) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G38300.1 | 7e-62 | G2-like family protein |
Link Out ? help Back to Top | |
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Phytozome | Prupe.6G282300.2.p |
Entrez Gene | 18773267 |