PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.6G254900.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | G2-like | ||||||||
Protein Properties | Length: 496aa MW: 54172.7 Da PI: 7.1376 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 61 | 2.4e-19 | 120 | 173 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r +W + L e+F+ a++q+ G +AtPk+i e+m+ ++Lt ++v+SHLQkYR+ Prupe.6G254900.2.p 120 KKRCEWKKSLGEKFMLAITQI-GLGNATPKRIIEFMNEPDLTTKNVASHLQKYRI 173 689******************.9*******************************6 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF46689 | 1.49E-13 | 118 | 176 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 2.3E-19 | 118 | 175 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 5.2E-18 | 120 | 173 | IPR006447 | Myb domain, plants |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 496 aa Download sequence Send to blast |
MASKSVLIVA LLFFVPILCL QGTYAYRIVR DAHRIRRDVS ASASASAPAS VLIVALLFCV 60 PILCLQSIYA YRIGRDASAS ASASASASAS ASASCAIGGF GNGNWDSHGD DEERTAAPRK 120 KRCEWKKSLG EKFMLAITQI GLGNATPKRI IEFMNEPDLT TKNVASHLQK YRIFLKGKEA 180 AAGDEDKLER LSRSSFARGH PELLFNNNER DQPHSQLLNQ PQMKTSIGST FQVQPSAGIG 240 STPPLTAVAS NSHGSIHAPL IRSGQSSLLN NNLANFPRQQ RTLGNRNGDQ LFIQENRPAA 300 FEMQQLSNNF ENGGMSFDPM NNVGLTNNNI GKNNLMQVYP LQSQPGTNNP FSYNLATSVN 360 QNGSNLTPMS SSFHNLWSHF NDVNQCEVDW QSLCSAGFET GASSAYQFPP NLPDNKGDLD 420 PQQNVPVLPP PEGNFNDQCG LLNINVGGGN VENSNRYLHD IYMKPDSLFT DEQDNCQPPS 480 QVHMHQKFMI FFHSC* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.6G254900.2.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020421054.1 | 0.0 | putative two-component response regulator ARR21 | ||||
TrEMBL | A0A251NVT1 | 0.0 | A0A251NVT1_PRUPE; Uncharacterized protein | ||||
STRING | XP_008242577.1 | 0.0 | (Prunus mume) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G16110.1 | 8e-18 | response regulator 2 |
Link Out ? help Back to Top | |
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Phytozome | Prupe.6G254900.2.p |