PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.6G253300.1.p
Common NamePRUPE_ppa007513mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family Dof
Protein Properties Length: 379aa    MW: 39718.8 Da    PI: 9.4424
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.6G253300.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof123.85.4e-3983142362
              zf-Dof   3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 
                         e alkcprC+stntkfCy+nnyslsqPr+fCk+CrryWt+GGalrnvPvGgg+r+nk+s+
  Prupe.6G253300.1.p  83 EPALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRSK 142
                         6789*****************************************************975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074788.0E-2970131IPR003851Zinc finger, Dof-type
PfamPF027011.2E-3285140IPR003851Zinc finger, Dof-type
PROSITE profilePS5088429.60986140IPR003851Zinc finger, Dof-type
PROSITE patternPS01361088124IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 379 aa     Download sequence    Send to blast
MVFSSIPAYL DPSNWQQQPN HHHLTGTTSN NSNINNNNNS HLLPPPPPPS NPHGSGSGAG  60
GVGSIRPGSM ADRARMANIP LPEPALKCPR CESTNTKFCY FNNYSLSQPR HFCKTCRRYW  120
TRGGALRNVP VGGGCRRNKR SKGSSSSTSK SPVSSSDRPT GSAGSPGPAN IGLNNTASTA  180
DNNIMMSPQI PPLRFMSPFA TDMALNYGMN VNNYGGGGGV GDMNSFHQMG SGLGSIGGSL  240
FNFQQQTPSF PFLTAGGGLD PSPAAAGMMF ESSGVEVTGY NQVRPRAPSG HGVAGMNSQM  300
AAVKMELESQ QHHQNQNQSQ NQELNLSRQL MGMSSGNDQY WGNGSGAGGG GTSNTAWTDL  360
SGFSSTTSTP SNNINNPL*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00295DAPTransfer from AT2G37590Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.6G253300.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020422195.10.0dof zinc finger protein DOF2.4
TrEMBLA0A251NVP40.0A0A251NVP4_PRUPE; Uncharacterized protein
STRINGEMJ065990.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF65634143
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37590.12e-41DNA binding with one finger 2.4