PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.6G249300.1.p | ||||||||
Common Name | PRUPE_ppa022066mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | C2H2 | ||||||||
Protein Properties | Length: 185aa MW: 20742.2 Da PI: 10.0037 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 10.9 | 0.0014 | 43 | 65 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C++ F++ L H +H Prupe.6G249300.1.p 43 FECKTCNRKFPSFQALGGHRASH 65 89**********99999998887 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF57667 | 5.43E-8 | 42 | 118 | No hit | No description |
Pfam | PF13912 | 7.2E-12 | 42 | 66 | IPR007087 | Zinc finger, C2H2 |
PROSITE profile | PS50157 | 10.325 | 43 | 70 | IPR007087 | Zinc finger, C2H2 |
SMART | SM00355 | 0.15 | 43 | 65 | IPR015880 | Zinc finger, C2H2-like |
PROSITE pattern | PS00028 | 0 | 45 | 65 | IPR007087 | Zinc finger, C2H2 |
Pfam | PF13912 | 1.6E-11 | 95 | 120 | IPR007087 | Zinc finger, C2H2 |
PROSITE profile | PS50157 | 9.39 | 96 | 123 | IPR007087 | Zinc finger, C2H2 |
SMART | SM00355 | 0.34 | 96 | 118 | IPR015880 | Zinc finger, C2H2-like |
PROSITE pattern | PS00028 | 0 | 98 | 118 | IPR007087 | Zinc finger, C2H2 |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0010200 | Biological Process | response to chitin | ||||
GO:0046872 | Molecular Function | metal ion binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 185 aa Download sequence Send to blast |
MKRMREDEVG LGMKGLDMEK FLMLVSCDME TKFRKCSSPN DVFECKTCNR KFPSFQALGG 60 HRASHNRPRT SMDHDQQSET RKRSNLMATK NKPKAHECSI CGLEFGMGQA LGGHMRRHRA 120 SNMNLGFSSK VPDEVVVASK IPVLRRSSSK RIMCLEMDLN LTPLENDLKL LFGAMAPKVD 180 AFVS* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.6G249300.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_007206686.1 | 1e-134 | zinc finger protein ZAT11 | ||||
TrEMBL | M5WM45 | 1e-133 | M5WM45_PRUPE; Uncharacterized protein | ||||
STRING | EMJ07885 | 1e-134 | (Prunus persica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF316 | 34 | 175 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G53600.1 | 2e-41 | C2H2 family protein |
Link Out ? help Back to Top | |
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Phytozome | Prupe.6G249300.1.p |
Entrez Gene | 18774998 |