PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.6G217300.1.p | ||||||||
Common Name | PRUPE_ppa011366mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | bZIP | ||||||||
Protein Properties | Length: 215aa MW: 24325.6 Da PI: 10.9566 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 35.5 | 2.2e-11 | 108 | 153 | 5 | 50 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 ++ rr+++NRe+ArrsR RK++ +e+L++ v L eN++Lk++l+ Prupe.6G217300.1.p 108 RKRRRMISNRESARRSRMRKQKHLENLRNQVNRLRIENRELKNRLS 153 5789**************************************9886 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.5E-14 | 104 | 168 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.312 | 106 | 169 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 7.6E-9 | 108 | 154 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 2.5E-9 | 108 | 154 | No hit | No description |
SuperFamily | SSF57959 | 7.72E-11 | 108 | 156 | No hit | No description |
CDD | cd14702 | 1.18E-18 | 109 | 153 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 111 | 126 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 215 aa Download sequence Send to blast |
MLSTVPAMLP SDSLLHFPAF DGGFTPGGGG FTPWDCSELF PAIQSPKPTI STLSSGPVQS 60 PKPVISSSGS DDDPNRSVEP VRMNRTHANA KSCPNDASNR AVSVVDERKR RRMISNRESA 120 RRSRMRKQKH LENLRNQVNR LRIENRELKN RLSYVLYHFQ RVRTDNDRLQ SEHVLLRQKL 180 SDIRQILVYR QLQHMSSAWP CNTVIPEQTP SLIA* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 107 | 111 | RKRRR |
2 | 107 | 128 | RKRRRMISNRESARRSRMRKQK |
3 | 120 | 127 | RRSRMRKQ |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.6G217300.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_007205896.1 | 1e-158 | light-inducible protein CPRF2 | ||||
TrEMBL | M5WJW1 | 1e-156 | M5WJW1_PRUPE; Uncharacterized protein | ||||
STRING | EMJ07095 | 1e-157 | (Prunus persica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF5435 | 32 | 54 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22850.2 | 3e-35 | basic leucine-zipper 6 |
Link Out ? help Back to Top | |
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Phytozome | Prupe.6G217300.1.p |
Entrez Gene | 18772950 |