PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.6G216400.3.p
Common NamePRUPE_ppa002612mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family AP2
Protein Properties Length: 569aa    MW: 63685.5 Da    PI: 7.1252
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.6G216400.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.23.1e-16236295155
                 AP2   1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                         s+y+GV++++++gr++A+++d  ++  g  ++ ++++lg ++ +e+Aa+a++ a++k++g
  Prupe.6G216400.3.p 236 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqsRKgRQVYLGGYDMEEKAARAYDLAALKYWG 295
                         78*******************988886678446*************************98 PP
2AP246.21.1e-14340389355
                 AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                         y+GV+++++ grW A+I  +     +k  +lg+f t eeAa+a++ a+ k++g
  Prupe.6G216400.3.p 340 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 389
                         9***************988532...5************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.65E-21236303No hitNo description
PfamPF008475.3E-13236295IPR001471AP2/ERF domain
SuperFamilySSF541718.5E-17236305IPR016177DNA-binding domain
PROSITE profilePS5103219.203237303IPR001471AP2/ERF domain
SMARTSM003802.6E-29237309IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.6E-16237304IPR001471AP2/ERF domain
PRINTSPR003673.9E-6238249IPR001471AP2/ERF domain
SuperFamilySSF541711.44E-17338398IPR016177DNA-binding domain
CDDcd000185.39E-24338399No hitNo description
PROSITE profilePS5103219.203339397IPR001471AP2/ERF domain
SMARTSM003806.0E-33339403IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.1E-18339397IPR001471AP2/ERF domain
PfamPF008471.5E-9340389IPR001471AP2/ERF domain
PRINTSPR003673.9E-6379399IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 569 aa     Download sequence    Send to blast
MVTTTTTSTP KLEDFFGGAT MGTHYENNDR EAMALSLDSM FYQQNNHHEP NNQNLINHLQ  60
QQQQQQQQQQ QNPRHQEQSV HQVQVQAQQQ QYSYYSGLRG HEMMLEEGHK ETHLAADNYN  120
LQQPRMGLDQ SISDMKCWIS RNYAANHAME QNMIGCMGDN GAESGSIGAM PYGDLQSLSL  180
SMSPGSQSSC VTGSQQISPT LADSVTMDTK KRGPEKVDQK QIVHRKSLDT FGQRTSQYRG  240
VTRHRWTGRY EAHLWDNSCK KEGQSRKGRQ VYLGGYDMEE KAARAYDLAA LKYWGPSTHI  300
NFPLENYQKE LEDMKNMTRQ EYVAHLRRKS SGFSRGASMY RGVTRHHQHG RWQARIGRVA  360
GNKDLYLGTF STQEEAAEAY DIAAIKFRGL NAVTNFDITR YDVDRIMASN TLLAGELAKR  420
NKETIPVNEA ATNQNHVAQT SNGEAIVSLK NINEGEDWKM ALYQSSQQLD QKQPSAEPHN  480
VIQAEAEDSA KMGAAHVSNA SSLVTSLSSS REGSPDKSCQ PSFFGMPPAA SKFFTSSSDT  540
VSSWIPTVQS RPGLTMPHMP IFAAWTDA*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.6G216400.3.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020422616.10.0AP2-like ethylene-responsive transcription factor ANT isoform X2
TrEMBLA0A251NTS30.0A0A251NTS3_PRUPE; Uncharacterized protein
STRINGEMJ095240.0(Prunus persica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37750.11e-136AP2 family protein