PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.6G176400.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 180aa MW: 20308.7 Da PI: 9.9329 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 40.1 | 9.4e-13 | 48 | 89 | 2 | 47 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaai 47 +y+G+r +k g+WvAeIr+p +kr r++lg++ t+ A +a++ Prupe.6G176400.1.p 48 QYRGIRMRK-EGKWVAEIREP---NKRSRIWLGSYTTPVAATRAYE 89 7*******9.7*********9...336*****************96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 2.02E-16 | 47 | 88 | No hit | No description |
Gene3D | G3DSA:3.30.730.10 | 3.3E-19 | 47 | 92 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 6.47E-13 | 48 | 95 | IPR016177 | DNA-binding domain |
PROSITE profile | PS51032 | 15.62 | 48 | 105 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 1.7E-6 | 48 | 89 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 1.1E-13 | 48 | 102 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 6.8E-6 | 49 | 60 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 6.8E-6 | 71 | 87 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 180 aa Download sequence Send to blast |
MEGEYCCSSS SSSSTTTTTS IEKGKQRQNQ QQQQQVGGNH DHRHQEKQYR GIRMRKEGKW 60 VAEIREPNKR SRIWLGSYTT PVAATRAYET TVCPYTPQLH NMSAASIRNK ATEVGAKVDA 120 VETAHCSPTS QSKTTSSLVN SQKPNLNKYL DPENSDEKLI EKKRGRKREG KEIIYIYIL* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.6G176400.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_007223577.1 | 7e-74 | ethylene-responsive transcription factor ERF011 | ||||
Refseq | XP_007223578.1 | 7e-74 | ethylene-responsive transcription factor ERF011 | ||||
Refseq | XP_021820292.1 | 7e-74 | ethylene-responsive transcription factor ERF011-like | ||||
Swissprot | Q9SNE1 | 4e-32 | ERF11_ARATH; Ethylene-responsive transcription factor ERF011 | ||||
TrEMBL | A0A251NRW3 | 1e-130 | A0A251NRW3_PRUPE; Uncharacterized protein | ||||
STRING | EMJ24776 | 3e-73 | (Prunus persica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1290 | 32 | 106 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G50260.1 | 4e-33 | cooperatively regulated by ethylene and jasmonate 1 |
Link Out ? help Back to Top | |
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Phytozome | Prupe.6G176400.1.p |
Publications ? help Back to Top | |||
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