PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Prupe.6G156000.8.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 275aa MW: 30615.4 Da PI: 7.5691 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 46.7 | 6.9e-15 | 200 | 252 | 5 | 57 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 +r rrk+kNRe+A rsR+RK+a+ eL kv Le+eN +Lkke ++++k+++ Prupe.6G156000.8.p 200 RRLRRKIKNRESAARSRARKQAYHNELVSKVSRLEEENIKLKKEKKKITKKCD 252 689***********************************************996 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 3.9E-11 | 196 | 261 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.185 | 198 | 250 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 3.44E-10 | 200 | 250 | No hit | No description |
Pfam | PF00170 | 9.7E-13 | 200 | 252 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 5.0E-13 | 200 | 251 | No hit | No description |
CDD | cd14707 | 1.77E-13 | 200 | 233 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 203 | 218 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 275 aa Download sequence Send to blast |
MGFQTMASQG NGQQSHFQPS PLLRQPSWYS LTLDEVKNQL GDTGKPLGSM NLDELLQNLW 60 TAEANQSIEM DIENTSSASS LQRQASLTLA RALSGKTVDE VWREIQQGQK KRYGEDMKCQ 120 DTEITLGETT LEDFLVQAGL FAEASLSPAI ALDTIEVAIP QSYPHNLGLS SSPSFGTHSD 180 TTTPGRKRDA SDAYEKTVER RLRRKIKNRE SAARSRARKQ AYHNELVSKV SRLEEENIKL 240 KKEKKKITKK CDVDTMVGLL EFYFGGDILR DGGK* |
Expression -- Description ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Description | |||||
Uniprot | DEVELOPMENTAL STAGE: Expressed in embryo during the latest stages of seed maturation. {ECO:0000269|PubMed:15642716}. | |||||
Uniprot | TISSUE SPECIFICITY: Predominantly expressed in seeds. {ECO:0000269|PubMed:12376636}. |
Functional Description ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Description | |||||
UniProt | Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development. |
Cis-element ? help Back to Top | |
---|---|
Source | Link |
PlantRegMap | Prupe.6G156000.8.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | |||
GenBank | KT223015 | 0.0 | KT223015.1 Prunus persica bZIP protein 5 mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_020422571.1 | 0.0 | ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X3 | ||||
Swissprot | Q9LES3 | 3e-59 | AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2 | ||||
TrEMBL | A0A251NQZ4 | 0.0 | A0A251NQZ4_PRUPE; Uncharacterized protein | ||||
STRING | EMJ07855 | 1e-180 | (Prunus persica) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G56850.1 | 8e-48 | ABA-responsive element binding protein 3 |
Link Out ? help Back to Top | |
---|---|
Phytozome | Prupe.6G156000.8.p |
Publications ? help Back to Top | |||
---|---|---|---|
|