PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.5G220700.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 264aa MW: 29547.4 Da PI: 4.4225 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 43.8 | 6.5e-14 | 16 | 60 | 4 | 52 |
AP2 4 kGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkk 52 GVr++k +gr++AeIrdp + +r +lg+f taeeAa+ + + +++ Prupe.5G220700.2.p 16 MGVRRRK-WGRYAAEIRDPI----QrRRKWLGTFATAEEAAAVYQKKKLE 60 5***998.**********83....35****************99877765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00380 | 6.4E-14 | 14 | 84 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 17.135 | 14 | 78 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 7.19E-14 | 15 | 61 | IPR016177 | DNA-binding domain |
PRINTS | PR00367 | 4.5E-6 | 15 | 26 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 2.4E-7 | 16 | 53 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 1.5E-17 | 16 | 61 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 4.5E-6 | 37 | 53 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 264 aa Download sequence Send to blast |
MILMPPILQV MMRNMMGVRR RKWGRYAAEI RDPIQRRRKW LGTFATAEEA AAVYQKKKLE 60 FDSIQSLGKT QRDYQNLQLS DKDKGAFESF QLTERTKHEF QGIPLSEESQ DSSGDAAIET 120 FSAEEAERVF CHPSPSSVLE ISGTASLGIG LKQAKEESSV EVFGGEGSVQ PCFEEELSIL 180 KFPVQPMLPL DIKQLDLGCG ENYVFSSLDQ FFDGMSDIVD YPAFNDGNGE VICLPALDSD 240 FGQQDFAWID QKPEHGMPMK FCS* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 19 | 38 | RRKWGRYAAEIRDPIQRRRK |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.5G220700.2.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | KT369552 | 0.0 | KT369552.1 Prunus pseudocerasus AP2/EREBP family transcription factor-like protein 20 mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020420006.1 | 0.0 | ethylene-responsive transcription factor ERF118 isoform X2 | ||||
Refseq | XP_020420007.1 | 0.0 | ethylene-responsive transcription factor ERF118 isoform X2 | ||||
TrEMBL | A0A251PC50 | 0.0 | A0A251PC50_PRUPE; Uncharacterized protein | ||||
STRING | EMJ10203 | 1e-144 | (Prunus persica) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68550.2 | 5e-16 | ERF family protein |
Link Out ? help Back to Top | |
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Phytozome | Prupe.5G220700.2.p |