PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.5G220700.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 437aa MW: 49386.8 Da PI: 6.6729 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 46.4 | 1e-14 | 188 | 233 | 3 | 52 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkk 52 ykGVr++k +gr++AeIrdp + +r +lg+f taeeAa+ + + +++ Prupe.5G220700.1.p 188 YKGVRRRK-WGRYAAEIRDPI----QrRRKWLGTFATAEEAAAVYQKKKLE 233 9****998.**********83....35***************999877765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF54171 | 5.75E-15 | 186 | 234 | IPR016177 | DNA-binding domain |
PROSITE profile | PS51032 | 18.426 | 187 | 251 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 7.8E-17 | 187 | 257 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 6.0E-19 | 187 | 234 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 4.9E-8 | 188 | 226 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 2.0E-7 | 188 | 199 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 2.0E-7 | 210 | 226 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 437 aa Download sequence Send to blast |
MSSRFHLLTG AQKKLWTSYH CLSCTLVLLS TFCMQYWSHG HTLKQSSPLF SMPLRSKSFP 60 FALPLGFRSF DLKKMPGFKT LVLNQHVKLN KLKTKQPNKE ENTSSVKRIR IIYNDPDATD 120 SSSDDEEYDG KEDRLLHDKR FVSEILVVDT KYESSADVLS HCKTNRGKIG VSMNFYDSKK 180 TKRSSSMYKG VRRRKWGRYA AEIRDPIQRR RKWLGTFATA EEAAAVYQKK KLEFDSIQSL 240 GKTQRDYQNL QLSDKDKGAF ESFQLTERTK HEFQGIPLSE ESQDSSGDAA IETFSAEEAE 300 RVFCHPSPSS VLEISGTASL GIGLKQAKEE SSVEVFGGEG SVQPCFEEEL SILKFPVQPM 360 LPLDIKQLDL GCGENYVFSS LDQFFDGMSD IVDYPAFNDG NGEVICLPAL DSDFGQQDFA 420 WIDQKPEHGM PMKFCS* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 188 | 194 | KGVRRRK |
2 | 192 | 211 | RRKWGRYAAEIRDPIQRRRK |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.5G220700.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | KT369552 | 0.0 | KT369552.1 Prunus pseudocerasus AP2/EREBP family transcription factor-like protein 20 mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020420005.1 | 0.0 | ethylene-responsive transcription factor ERF118 isoform X1 | ||||
TrEMBL | A0A251PC35 | 0.0 | A0A251PC35_PRUPE; Uncharacterized protein | ||||
STRING | EMJ10203 | 0.0 | (Prunus persica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF13451 | 20 | 27 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G27950.1 | 6e-27 | cytokinin response factor 4 |
Link Out ? help Back to Top | |
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Phytozome | Prupe.5G220700.1.p |