PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.5G201500.2.p
Common NamePRUPE_ppa004205mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 499aa    MW: 55838.9 Da    PI: 4.0605
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.5G201500.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.18.5e-08232280247
                         SSS-HHHHHHHHHHH....HHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
     Myb_DNA-binding   2 grWTteEdellvdav....kqlGggtWktIartmgkgRtlkqcksrwqky 47 
                         +rW++eE++l+ ++v    + lG++ W+  +  ++  Rt k+++s+++++
  Prupe.5G201500.2.p 232 QRWSEEEEQLFHQVVfsnpASLGKNFWDNLSTVFP-SRTKKEIVSYYFNV 280
                         79*************4444455666**********.***********996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007172.2E-4230283IPR001005SANT/Myb domain
PfamPF002491.3E-6232280IPR001005SANT/Myb domain
SuperFamilySSF466891.79E-5232281IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.604.7E-5233279IPR009057Homeodomain-like
CDDcd001672.99E-8233281No hitNo description
PROSITE profilePS500906.168233281IPR017877Myb-like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 499 aa     Download sequence    Send to blast
MVQKRPLDDE QIFVSFKHPR QVGHSKELVS FSESVFPEDV SEKPQTLGGE DVETSGPGSF  60
TISSWTTSST SEEDSLLEAP FHGSFPDCFN PERPIRTLAQ SEDIYSFLLD HPPRKSVSIG  120
PEHQAEVPLW GAQGNNNNSN NLDTSEAVSN SDLEDEKRLM GTCVIPMPDS DLSADTGCIA  180
GIGRTDCSCE DEDSVRCVRQ HILEAREKLI KTIGPKRFEE LGFSDMGEQV AQRWSEEEEQ  240
LFHQVVFSNP ASLGKNFWDN LSTVFPSRTK KEIVSYYFNV FMLVKRAGQN RYDPINVDSD  300
NDEWQGSNDY GDNQLAVTED EDSVVESPIC QNVPGYYQSW KDNLQEYDEE VVDDTCDDNV  360
NVDMFGGGTK QILDRCYGLV DNCSTCPIAQ LQDKISWDEK GDQEVQDDSC TSFDAAAASQ  420
ENQLKSEEGN HWSGGFNGSS NRGDHEYVLE PCDTKIWDAG YMTCPENKVD FLPTCNMIEE  480
VFGKESWNYK ARDGKNLG*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ppe.46151e-157fruit
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.5G201500.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020419648.10.0uncharacterized protein LOC18777586 isoform X2
TrEMBLA0A251PB440.0A0A251PB44_PRUPE; Uncharacterized protein
STRINGEMJ111040.0(Prunus persica)