PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.5G201500.1.p
Common NamePRUPE_ppa004205mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 524aa    MW: 58732.1 Da    PI: 4.0639
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.5G201500.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding249e-08257305247
                         SSS-HHHHHHHHHHH....HHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
     Myb_DNA-binding   2 grWTteEdellvdav....kqlGggtWktIartmgkgRtlkqcksrwqky 47 
                         +rW++eE++l+ ++v    + lG++ W+  +  ++  Rt k+++s+++++
  Prupe.5G201500.1.p 257 QRWSEEEEQLFHQVVfsnpASLGKNFWDNLSTVFP-SRTKKEIVSYYFNV 305
                         79*************4444455666**********.***********996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007172.2E-4255308IPR001005SANT/Myb domain
PfamPF002491.4E-6257305IPR001005SANT/Myb domain
SuperFamilySSF466891.94E-5257306IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.605.0E-5258304IPR009057Homeodomain-like
PROSITE profilePS500906.168258306IPR017877Myb-like domain
CDDcd001674.54E-8258306No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 524 aa     Download sequence    Send to blast
MVQKRPLDDE QIFVSFKHPR QVGHSKELVS FSESVFPEDV SEKPQTLENG WAKVNDKGEE  60
KLSDDIFYDL PKGGEDVETS GPGSFTISSW TTSSTSEEDS LLEAPFHGSF PDCFNPERPI  120
RTLAQSEDIY SFLLDHPPRK SVSIGPEHQA EVPLWGAQGN NNNSNNLDTS EAVSNSDLED  180
EKRLMGTCVI PMPDSDLSAD TGCIAGIGRT DCSCEDEDSV RCVRQHILEA REKLIKTIGP  240
KRFEELGFSD MGEQVAQRWS EEEEQLFHQV VFSNPASLGK NFWDNLSTVF PSRTKKEIVS  300
YYFNVFMLVK RAGQNRYDPI NVDSDNDEWQ GSNDYGDNQL AVTEDEDSVV ESPICQNVPG  360
YYQSWKDNLQ EYDEEVVDDT CDDNVNVDMF GGGTKQILDR CYGLVDNCST CPIAQLQDKI  420
SWDEKGDQEV QDDSCTSFDA AAASQENQLK SEEGNHWSGG FNGSSNRGDH EYVLEPCDTK  480
IWDAGYMTCP ENKVDFLPTC NMIEEVFGKE SWNYKARDGK NLG*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ppe.46151e-157fruit
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.5G201500.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007209905.10.0uncharacterized protein LOC18777586 isoform X1
TrEMBLM5WBK40.0M5WBK4_PRUPE; Uncharacterized protein
STRINGEMJ111040.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2153810