PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.5G136200.1.p
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 313aa    MW: 33152.4 Da    PI: 6.5997
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.5G136200.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.22.1e-182373256
                 AP2  2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkklege 56
                        ++ GVr+++ +grWvAeI+d      ++ r +lg+f+tae+Aa+a++ a+++l+g+
  Prupe.5G136200.1.p 23 RFVGVRQRP-SGRWVAEIKD----SlQKVRLWLGTFDTAEDAARAYDDAARALRGA 73
                        689******.7*********....4456*************************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008472.2E-122372IPR001471AP2/ERF domain
CDDcd000181.84E-162380No hitNo description
SMARTSM003803.2E-352386IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.106.4E-292380IPR001471AP2/ERF domain
PROSITE profilePS5103220.5082380IPR001471AP2/ERF domain
SuperFamilySSF541715.3E-202481IPR016177DNA-binding domain
PRINTSPR003679.3E-82435IPR001471AP2/ERF domain
PRINTSPR003679.3E-84662IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    Send to blast
MGLRAQNDGV RGRRKSSTRG HHRFVGVRQR PSGRWVAEIK DSLQKVRLWL GTFDTAEDAA  60
RAYDDAARAL RGANARTNFE LPQSTNESGH ANGGAGVAEN VEPFSFEAVC GNGAEADGLL  120
GALRAKLLDG KGCVVPQPQG NNGGAKMEPF PIGPRGVVGF VNPNPPPSSS GSAKEDPIVL  180
DINGHDHRWG HHQAQPSHTA SNQSMAWSNE SPALAYDQVP NWSTWSTQTG SFTEQCPMEL  240
PSQITSLARD GKVTALSTQQ LSQIDGSAIL GSSASGAWPS DQQQFLHCDN NWAAGGANAS  300
WDPLFYASSV LG*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A4e-1421861276Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.5G136200.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020419820.10.0AP2-like ethylene-responsive transcription factor PLT1
TrEMBLA0A251P8130.0A0A251P813_PRUPE; Uncharacterized protein
STRINGXP_008367467.11e-121(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF113333035
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.11e-15related to AP2 11