PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.5G113500.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | bZIP | ||||||||
Protein Properties | Length: 274aa MW: 29687.1 Da PI: 6.4147 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 53.5 | 5.3e-17 | 142 | 204 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+++kre+rkq NRe+ArrsR RK+ae eeL + +++L +e +aLk++leelk ++kl+ e+ Prupe.5G113500.1.p 142 ERQVKREKRKQANRESARRSRMRKQAEYEELVRTFESLNTEKMALKSKLEELKGDSEKLRLEN 204 799********************************************************9887 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 4.0E-12 | 141 | 201 | No hit | No description |
Pfam | PF00170 | 2.4E-15 | 142 | 204 | IPR004827 | Basic-leucine zipper domain |
SMART | SM00338 | 1.5E-13 | 142 | 206 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.45 | 144 | 207 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.25E-8 | 145 | 200 | No hit | No description |
CDD | cd14702 | 4.16E-17 | 147 | 193 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 149 | 164 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 274 aa Download sequence Send to blast |
MDQDVKKKLK GLDGTAVPVG YDSLKDTGHP VLEASKSLEQ NIDGLTDGSD GNTKEDNHHT 60 QRNNGSGSMR FADNDVKVHT QVRPTTNGEV NENSTNASGT GSPAGFLGVS LRSPYEKIGI 120 STAFVAPSAG AGLPFDAMVL DERQVKREKR KQANRESARR SRMRKQAEYE ELVRTFESLN 180 TEKMALKSKL EELKGDSEKL RLENATLMEK LKHAQVVPKG GIASVEIEVD LDLPTGTENI 240 LSNLGSVSRN AQLDCEAHES SMSETKLHAV AAR* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 158 | 165 | RRSRMRKQ |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.5G113500.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020420277.1 | 0.0 | G-box-binding factor 3 isoform X1 | ||||
Refseq | XP_020420278.1 | 0.0 | G-box-binding factor 3 isoform X1 | ||||
TrEMBL | A0A251P6Z4 | 0.0 | A0A251P6Z4_PRUPE; Uncharacterized protein | ||||
STRING | XP_008239083.1 | 0.0 | (Prunus mume) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF15470 | 8 | 10 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46270.1 | 1e-26 | G-box binding factor 3 |
Link Out ? help Back to Top | |
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Phytozome | Prupe.5G113500.1.p |