PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.5G103500.1.p
Common NamePRUPE_ppa026661mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 611aa    MW: 69161.2 Da    PI: 4.8423
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.5G103500.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.66e-08509553247
                         SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
     Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                         + WT+eE+++++d+vk   +  W++ +r +  ++t+++++s+++++
  Prupe.5G103500.1.p 509 LQWTAEEEKRFKDLVKSNSPSFWNRASRWFR-KKTRENLVSYYFNV 553
                         57*****************************.9**********996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM010141.6E-1445137No hitNo description
Gene3DG3DSA:1.10.150.601.1E-1446143IPR001606ARID DNA-binding domain
SuperFamilySSF467741.14E-1747141IPR001606ARID DNA-binding domain
PROSITE profilePS5101119.27448141IPR001606ARID DNA-binding domain
SMARTSM005013.5E-1749142IPR001606ARID DNA-binding domain
PfamPF013886.3E-1156137IPR001606ARID DNA-binding domain
CDDcd001679.58E-4511554No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005773Cellular Componentvacuole
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 611 aa     Download sequence    Send to blast
MAGWSSLTPG SVLDCVETND AYQKNGSCIG SDIDVRDGVE CDEDDDEVRL RCTFDQVLSV  60
FVKEIGDRGV VRPIPAVIDD RQPVDLFKLF CLVRDRGGYD WVSKNSLWSF VAKELGLDGG  120
ATASVKLIYF KYLNELEKWF RESCKSRSSG NGQSGLYGEF QLSSELEREF RDLLLDGPEQ  180
KGKGDGPVQF ESDENGKIEF NLSDTKDAYG MHAGADQCKD DDEEKVCNDD QNGVLISLDS  240
LNKKENDRKR KRESLSGMLN WVVQIAKQPN DPSIGVIPGP TNWREHKGDE CWFQVIRARE  300
ALLLRRNVDS KTEESLLQKK LKTHPLLYED NVVAGHQSSE RLRCSERFPN SVKSRSCPCC  360
SSCSVPQSNL ISPRKKELDN NSKEQAPEEV DLLATNTMVC PSVDAPHEKH VSVGTLFQAD  420
VPEWTGVASE SDIKWLGTRV WPLQCEEDSS LHEADLTGKG RPDLCGCQLP GSVVCIRFHI  480
AEARMKLKRE LGSLFYRWRF DRMGEEVSLQ WTAEEEKRFK DLVKSNSPSF WNRASRWFRK  540
KTRENLVSYY FNVFLVQSRS YQNRVTPKNI DSDDDETEFG SFSNGFRHDA VEVSANFEAC  600
SQNQQCTDLD *
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.5G103500.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007208888.10.0AT-rich interactive domain-containing protein 2 isoform X1
TrEMBLM5W8M50.0M5W8M5_PRUPE; Uncharacterized protein
STRINGEMJ100870.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF399678