PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.5G093400.2.p
Common NamePRUPE_ppa021723mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family MYB
Protein Properties Length: 380aa    MW: 42280.6 Da    PI: 8.8987
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.5G093400.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding50.93.5e-16751348
                        SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
     Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                         WT+eEd ll ++v+++   +Wk Ia++++ gRt+ qc  rwqk+l
  Prupe.5G093400.2.p  7 CWTEEEDNLLGELVRKFNRSNWKEIAACLP-GRTDVQCLQRWQKVL 51
                        6*****************99**********.************986 PP
2Myb_DNA-binding58.91.1e-1857103148
                         TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
     Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                         +g+WT+eEd  +++ v+ +G ++W+ Ia+ ++ gR +kqc++rw+++l
  Prupe.5G093400.2.p  57 KGPWTKEEDNCIIKQVESHGAKRWSVIAKFLP-GRMGKQCRERWYNHL 103
                         79******************************.*************97 PP
3Myb_DNA-binding47.73.7e-15109151145
                         TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
     Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 
                         r++WT+eE+  l  +++++G++ W+ Iar ++ gRt++ +k++w+
  Prupe.5G093400.2.p 109 RNAWTEEEEWVLTYYHQLFGNK-WAEIARFLP-GRTDNAIKNHWN 151
                         789*******************.*********.***********8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129417.075151IPR017930Myb domain
SMARTSM007172.5E-14453IPR001005SANT/Myb domain
SuperFamilySSF466891.79E-16761IPR009057Homeodomain-like
PfamPF002493.3E-14751IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.609.7E-24859IPR009057Homeodomain-like
CDDcd001671.76E-13851No hitNo description
PROSITE profilePS5129429.18752107IPR017930Myb domain
SuperFamilySSF466891.95E-3054150IPR009057Homeodomain-like
SMARTSM007173.9E-1656105IPR001005SANT/Myb domain
PfamPF002496.6E-1857103IPR001005SANT/Myb domain
CDDcd001678.69E-1659103No hitNo description
Gene3DG3DSA:1.10.10.601.3E-2460103IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.605.1E-20104158IPR009057Homeodomain-like
SMARTSM007179.8E-14108156IPR001005SANT/Myb domain
PROSITE profilePS5129417.765108158IPR017930Myb domain
PfamPF002494.4E-12109151IPR001005SANT/Myb domain
CDDcd001675.07E-10111154No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 380 aa     Download sequence    Send to blast
MRRSAKCWTE EEDNLLGELV RKFNRSNWKE IAACLPGRTD VQCLQRWQKV LNPEIVKGPW  60
TKEEDNCIIK QVESHGAKRW SVIAKFLPGR MGKQCRERWY NHLCPAINRN AWTEEEEWVL  120
TYYHQLFGNK WAEIARFLPG RTDNAIKNHW NCTLKRKLDS YSPNGCDVDM HPDVWNGELR  180
SGLVEINPAG QISDRLASLN QRTGLEISDS ACSTELTLGC SYRHELCSEW KPVKVQKCRS  240
SDRGASSLTN LITSGSSKHS PLSASSSVFV GASASTRSSP LESPSCYSTP QSRPQNVNVN  300
LSSGSSPGSR LKNLALSFKN TPSIIRKRSS RRPDASSAAV KSLGRCLERE FDAENDSGVT  360
KCGQLFSAHA TSSDVNVGV*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1h88_C2e-6681589159MYB PROTO-ONCOGENE PROTEIN
1h89_C2e-6681589159MYB PROTO-ONCOGENE PROTEIN
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.5G093400.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020419693.10.0transcription factor MYB3R-5 isoform X1
TrEMBLA0A251P5X50.0A0A251P5X5_PRUPE; Uncharacterized protein
STRINGEMJ121730.0(Prunus persica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32730.18e-74Homeodomain-like protein